PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010908748.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 166aa    MW: 17651.4 Da    PI: 10.0234
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010908748.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.9e-21857255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a+++a++ l+g
  XP_010908748.1  8 RYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDQAARTLRG 57
                    69*******.**********883....5************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.958865IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-22866IPR016177DNA-binding domain
CDDcd000182.73E-29864No hitNo description
Gene3DG3DSA:3.30.730.107.1E-32865IPR001471AP2/ERF domain
PfamPF008474.4E-14857IPR001471AP2/ERF domain
SMARTSM003802.4E-37871IPR001471AP2/ERF domain
PRINTSPR003674.7E-11920IPR001471AP2/ERF domain
PRINTSPR003674.7E-113147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MGSRGEGRYR GVRKRPWGRY AAEIRDPWKK TRVWLGTFDT PEEAALAYDQ AARTLRGVKA  60
KTNFPLPPPP PSHLSLDLNL PCHLWMGPPQ PPPHPPQAVA AAMGSLPPST TLMLGRFSGG  120
GACPPCLGIV APPESPPAGT AFFGVVGRGL PFDLNEPPPA SSVLFG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-227651372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00645PBMTransfer from LOC_Os05g41760Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010908748.11e-116ethylene-responsive transcription factor 12
SwissprotQ94ID62e-36ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A2H3X4322e-70A0A2H3X432_PHODC; ethylene-responsive transcription factor 12-like
STRINGXP_008778008.14e-71(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.14e-34ERF domain protein 12