PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010908747.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family | bHLH | ||||||||
Protein Properties | Length: 332aa MW: 37013.9 Da PI: 6.3533 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.4 | 3e-09 | 173 | 220 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq XP_010908747.1 173 SHSLAERVRREKISERMKLLQGLVPGC----DKITGKALMLDEIINYVQSLQ 220 8*************************9....899*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.01E-16 | 167 | 235 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.23E-10 | 167 | 224 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.7E-15 | 169 | 233 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.237 | 169 | 219 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.3E-6 | 173 | 220 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.0E-8 | 175 | 225 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence Send to blast |
MAAFPYQHHH PLLLDSPYLP NSPIKLPQLP LQLGEMTNAS PGFLYYNAPE AIAEASATEA 60 RTFGSSNSLE SAIMVPSGDN QMDYSSSVLV EPHGGEGPTK AQCPTEKKRK NINDTSPNSD 120 QSKDTKESKS RRQKKFIEDK KPKADEVKET KPYEEPPTGY IHVRARRGQA TDSHSLAERV 180 RREKISERMK LLQGLVPGCD KITGKALMLD EIINYVQSLQ NQVEFLSMKL ASVSPVMNDF 240 AVDFNGHVDQ QQKVGSMSQV SLPLPPVLQK NHIEPITFEE TIAKDYMMMD PSPFLLHGQG 300 PLDFSQDNGV QVGNERQGVL HPMMFNNMCS FQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010908747.1 | 0.0 | transcription factor bHLH137 isoform X1 | ||||
TrEMBL | A0A2H3XYJ7 | 1e-172 | A0A2H3XYJ7_PHODC; transcription factor bHLH137-like | ||||
STRING | XP_008790706.1 | 1e-150 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2358 | 37 | 91 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 7e-55 | bHLH family protein |