PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010908747.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 332aa    MW: 37013.9 Da    PI: 6.3533
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010908747.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.43e-09173220455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  XP_010908747.1 173 SHSLAERVRREKISERMKLLQGLVPGC----DKITGKALMLDEIINYVQSLQ 220
                     8*************************9....899*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-16167235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.23E-10167224No hitNo description
Gene3DG3DSA:4.10.280.101.7E-15169233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.237169219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-6173220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-8175225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MAAFPYQHHH PLLLDSPYLP NSPIKLPQLP LQLGEMTNAS PGFLYYNAPE AIAEASATEA  60
RTFGSSNSLE SAIMVPSGDN QMDYSSSVLV EPHGGEGPTK AQCPTEKKRK NINDTSPNSD  120
QSKDTKESKS RRQKKFIEDK KPKADEVKET KPYEEPPTGY IHVRARRGQA TDSHSLAERV  180
RREKISERMK LLQGLVPGCD KITGKALMLD EIINYVQSLQ NQVEFLSMKL ASVSPVMNDF  240
AVDFNGHVDQ QQKVGSMSQV SLPLPPVLQK NHIEPITFEE TIAKDYMMMD PSPFLLHGQG  300
PLDFSQDNGV QVGNERQGVL HPMMFNNMCS FQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010908747.10.0transcription factor bHLH137 isoform X1
TrEMBLA0A2H3XYJ71e-172A0A2H3XYJ7_PHODC; transcription factor bHLH137-like
STRINGXP_008790706.11e-150(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23583791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.27e-55bHLH family protein