PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907586.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 493aa    MW: 54213.7 Da    PI: 6.8864
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907586.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.3e-10183214435
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekv 35 
                      k  rr+++NReAAr+sR+RKka++++Le   
  XP_010907586.1 183 AKTLRRLAQNREAARKSRLRKKAYVQQLESSR 214
                     6889************************9743 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-7180256IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-7182226No hitNo description
PROSITE profilePS502179.324182226IPR004827Basic-leucine zipper domain
PfamPF001704.9E-7183223IPR004827Basic-leucine zipper domain
CDDcd147089.36E-24184236No hitNo description
SuperFamilySSF579596.88E-7184227No hitNo description
PROSITE patternPS000360187202IPR004827Basic-leucine zipper domain
PfamPF141444.2E-31264339IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MVQGGEDSGM ANHRVGETSL SNSGPSNQTP TYGIHGTKPA ATNFFDQGGT GYFGELEEAL  60
MQGVDGIRSD GGGKDYFTSR LPTLEIFPSW PMRFQQNPRG NSQSAGSTDS GSAQVTISQL  120
ESESPVSRKA FSEQSADQKQ QQQGMMASDA SRAGATPNYQ QGAQEKKKMG GSTTGKDTKM  180
LDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIRLQQL EQELQRARSQ GLFLGGGSAS  240
GDISSGAAMF DMEYNRWLDD TSKHMSELRG GLQAHLPDSN LAITVDECIA HYDELFRLKG  300
VAAKSDVFHL LTGMWTTPAE RCFLWMGGFK PSELLKILMP QLDPLTEQQL MGICNLQQSS  360
QQAEEALSQG LEQLHQSLAD TVASGSLSDG TDITNYMGHM AIALGKLANL EGFIQQADNL  420
RQQTIHQMRR ILTIRQAARC FLAIGEYYSR LRALSSLWAS RPQENLITND SVCPTTTDLQ  480
IVHHPIHHHF SAF
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response (By similarity). Acts as transcriptional activator in vitro (PubMed:22353606). {ECO:0000250|UniProtKB:Q7X993, ECO:0000269|PubMed:22353606}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907586.10.0transcription factor TGAL5
SwissprotQ5N7C70.0LG2_ORYSJ; Transcription factor LG2
TrEMBLA0A2H3YWG10.0A0A2H3YWG1_PHODC; transcription factor LG2
STRINGXP_008787868.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38093166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-137bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    A rice transient assay system identifies a novel domain in NRR required for interaction with NH1/OsNPR1 and inhibition of NH1-mediated transcriptional activation.
    Plant Methods, 2012. 8(1): p. 6
    [PMID:22353606]
  3. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]