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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010907103.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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Family |
bZIP |
Protein Properties |
Length: 484aa MW: 53172.8 Da PI: 7.2143 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010907103.1 | genome | OG | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 33.6 | 8.3e-11 | 169 | 210 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka+i++Le +L++ ++L
XP_010907103.1 169 AKTLRRLAQNREAARKSRLRKKAYIQQLESSRIKLTQLEQDL 210
5889*************************9777777666655 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 484 aa
Download sequence Send
to blast |
MENHRVGETG LSESGPSSQP VAYGVHGITP AATNFFDQEG TAYFGELEEA LMQGVAGIRS 60 DGDRKPFFTP PTLEIFPSWP MRFQQTPKGN SQPAKSSDSG SAQNTISQLD LESPVSIKAS 120 SGLRGQQQGM MASDAPRAGA AAPNHQPKTQ DNRRVAGSTA EKDGKILDAK TLRRLAQNRE 180 AARKSRLRKK AYIQQLESSR IKLTQLEQDL QRARSQGLFL GAAGAGGNIS SAAAVFDMEY 240 SRWLDENCKR MTELREGLQA HLSDGDLRVA VDECLTHYDE IFRLKGVAAK SDVFHLITGT 300 WTTPAERFFL WMGGFRPSEL LKSSFEQILI PQMDPLTEQQ LVGICNLQQS SQQAEEALSQ 360 GLEQLHQSLA DTVASGALSE DTNVGNYMSH IAIALGKLAN LEGFVRQADN LRQQTLHQMR 420 RILTVRQAAR CFLAIGEYHS RLRALSSLWA SHPRGSLITN ESACPTTTDL QIIHQPVHSH 480 FSAF
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response (By similarity). Acts as transcriptional activator in vitro (PubMed:22353606). {ECO:0000250|UniProtKB:Q7X993, ECO:0000269|PubMed:22353606}. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Chern M, et al.
A rice transient assay system identifies a novel domain in NRR required for interaction with NH1/OsNPR1 and inhibition of NH1-mediated transcriptional activation. Plant Methods, 2012. 8(1): p. 6 [PMID:22353606] - Chern M, et al.
Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]
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