 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010906412.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
NF-YC |
| Protein Properties |
Length: 286aa MW: 31590.7 Da PI: 4.9626 |
| Description |
NF-YC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010906412.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YC | 60.1 | 4.8e-19 | 6 | 86 | 18 | 98 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
++++P +rikki++adedv +i+ +Pvl+ska elf+ +l r++ + + +t+ ++++v + ++fdfl div +
XP_010906412.1 6 DTRFPASRIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYGITLQRGMKTMSALHLKQCVHSFNVFDFLKDIVSK 86
5789**************************************************************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MRKKLDTRFP ASRIKKIMQA DEDVGKIALA VPVLVSKALE LFLQDLCDRT YGITLQRGMK 60
TMSALHLKQC VHSFNVFDFL KDIVSKVPDM GSSDPGGDDR SAKRRKAAED DNDSEEDLKR 120
KAQHEAAGHS SGGRGWGRGR GRGRGARGVH GVDRDGAHYD KYEDDPGTSP QHSDRPPHMK 180
SEIMDDSLSA RESKETTVSN SNTGAAVRNF DLNLDLDENG DTSTATASAT ATATATSFET 240
DHEMKHEECP GWSLADMDKM AIDPIQFALS NRRLDEEEED YDNEES
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 133 | 142 | RGWGRGRGRG |
