PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010906034.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 197aa    MW: 21350.3 Da    PI: 10.2582
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010906034.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.9e-213887255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a+++a+++l+g
  XP_010906034.1 38 HFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARNLRG 87
                    69*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.81E-273797No hitNo description
PROSITE profilePS5103222.2733895IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-303895IPR001471AP2/ERF domain
SMARTSM003801.5E-3438101IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-213896IPR016177DNA-binding domain
PfamPF008471.4E-133887IPR001471AP2/ERF domain
PRINTSPR003672.5E-103950IPR001471AP2/ERF domain
PRINTSPR003672.5E-106177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MAVETLRLRK DGFAAGEKEQ AAAAAAVGVT GGPGKEAHFR GVRKRPWGRF AAEIRDPWKK  60
TRKWLGTFDT AEEAARAYDE AARNLRGPKA KTNFGYSGDS GEIPSSVAVT IAAAAPAGVW  120
GLQEWRSAYP GPPDGRDLFL GPPAASGSDF PAYRFEAVEL MVRSKQEKKM MAAIARKEEE  180
TKKKPLAFDL NLPAPLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-2035102270ATERF1
3gcc_A5e-2035102270ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010906034.11e-139ethylene-responsive transcription factor 12
TrEMBLA0A2H3YS421e-110A0A2H3YS42_PHODC; ethylene-responsive transcription factor 11-like
STRINGXP_008802835.11e-111(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.11e-21ethylene responsive element binding factor 3