PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010905671.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ARR-B
Protein Properties Length: 757aa    MW: 82670 Da    PI: 6.0279
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010905671.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.12e-28215268155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ +LH++Fv av+qL G+ekA+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  XP_010905671.1 215 KPRVVWSVDLHQQFVAAVKQL-GIEKAVPKKILELMNVPGLTRENVASHLQKYRL 268
                     79*******************.********************************8 PP
2Response_reg76.31.1e-25331411109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+p+ +++l ++l+k  y +v++++ +  al++l+ek+  +Dl+l D+ mp+mdG++ll++i  e  +lp+i+++a + ++ + + +  G
  XP_010905671.1  33 VLVVDDDPTCLKILDKMLRKCLY-DVTTCSRAVVALAMLREKKgeFDLVLSDVYMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKDVVMKGVTHG 125
                     89*********************.***************999999**********************6654.8********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +e+l +
  XP_010905671.1 126 ACDYLIKPVRMEALKN 141
                     ***********99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23003.9E-4230174No hitNo description
SuperFamilySSF521721.85E-3530171IPR011006CheY-like superfamily
SMARTSM004482.0E-3031143IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.14332147IPR001789Signal transduction response regulator, receiver domain
PfamPF000728.8E-2333141IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.26E-2834146No hitNo description
PROSITE profilePS5129410.642212271IPR017930Myb domain
SuperFamilySSF466894.12E-19212272IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-29214273IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-24215268IPR006447Myb domain, plants
PfamPF002495.7E-7217267IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 757 aa     Download sequence    Send to blast
MDPSSRAAAS TASSGRPRDA LRPLSDFPVG LRVLVVDDDP TCLKILDKML RKCLYDVTTC  60
SRAVVALAML REKKGEFDLV LSDVYMPDMD GFKLLEHIGL EMDLPVIMMS ADDGKDVVMK  120
GVTHGACDYL IKPVRMEALK NIWQHVVRKR RNELKELEHS GSAEENDRQR RLLEEGDNAS  180
SVNEGSWKNA KRRRGGKEEE EEEVEEREDP STLKKPRVVW SVDLHQQFVA AVKQLGIEKA  240
VPKKILELMN VPGLTRENVA SHLQKYRLYL RRVNGPQHQG RLDTPYTGSS EATFHSVGSF  300
DGFDLQSLAA GQLSPQNLMA LHSVPGRVTN TSIGMSSVDQ IGFFNSSVEI SNASNMRPPL  360
MQQIDKKQMN FISGPPTSME SRQLGQSQQL VQSYGSMGLQ TSEGASGLFN LPSSQRASTT  420
FPGGSINANL SNSLVMQMTH QGPQFSLSQQ QNQIHISMPQ LPQTRGPIQN GIAGEHDSRL  480
STTIAQILPN DISSDVLGSS GSNMNVDTSL PGGYMNASSY GSVSHALYAD FPNSCMNEST  540
GSCYPLARSA GATSLTSTGM LQDVMPPVGN VEALGSSAGL KGAKDSVPNY DLFSELHQSK  600
SQDWKLQNIN VSYHSAQQLG SKQSNIAFGC PSLAHQDSIA TIKDGSCRNT CTVRKEIFSV  660
RTEIGHEKGE CIAQRNSTIL LENSVRVKAE GMSDHSCQDL LFDDNIIPDE LMDAVGKKHQ  720
EGVVQVDPEL SFDGYSSGNS VARWLPPNDA TSYGLLQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-22214274464ARR10-B
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010905671.10.0two-component response regulator ARR1
TrEMBLA0A2H3ZH140.0A0A2H3ZH14_PHODC; two-component response regulator ARR1-like
STRINGXP_008813715.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2940624
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.21e-137response regulator 1