PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010905648.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 337aa    MW: 36957.9 Da    PI: 4.7279
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010905648.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.5e-112653051055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RRdriN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_010905648.1 265 RKRRDRINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 305
                     9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.977255304IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.97E-14257320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.3E-11261310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-12261317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.57E-12264309No hitNo description
PfamPF000103.2E-8265305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0016049Biological Processcell growth
GO:0048766Biological Processroot hair initiation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MPIEESEIMA QLLGTYHIPT EHDRHDPSFE NPSISWSSDH VSDLYYCLDS ANANTNSSSY  60
YWPQGDDSSI STSGFFAPPS EFGGCYLSGS NEVCGINTSF ASMDYCMEGK QLTTPSFEVA  120
PNPTNIDPIS LNDMTNSDAM GDSCMNISES TTPDQMSQPK RRLHVGEDDN PAESPKKKVH  180
KTLKKAQSKG AEKSSKSGDE EKSNVVVNGQ SSSCCSLDDD LNIFQEPNGG GSTSPSAKGS  240
PALNLNGKSR ASRGAATDPQ SLHARKRRDR INERLRILQN LVPNGTKVDI STMLEEAVQY  300
VKFLQLQIKL LSSDELWMYA PIAYNRMNID LDFKVSP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010905648.30.0transcription factor bHLH139
TrEMBLA0A2H3Y2X40.0A0A2H3Y2X4_PHODC; transcription factor bHLH84-like
STRINGXP_008792628.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43103270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-56bHLH family protein