 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010904916.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
| Family |
LBD |
| Protein Properties |
Length: 251aa MW: 27435.1 Da PI: 8.898 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010904916.1 | genome | OG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 99.4 | 3.4e-31 | 37 | 128 | 1 | 91 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlk 91
aCaaCk++r+kC+ +C la yfpae++++f vhk+FG sn++k+lka++ re a+++l++eAe+r dP G+++ +++l+++ + l+
XP_010904916.1 37 ACAACKHQRKKCTGNCELASYFPAERTREFGLVHKVFGISNLTKMLKAIDSIPdRELAVETLTWEAEWRNIDPSVGCYNEVMRLKHENAVLR 128
7************************************************77655******************************99877665 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MQRNISHPPQ PLPPPPGPAP APVAGAGAGA GHGGHQACAA CKHQRKKCTG NCELASYFPA 60
ERTREFGLVH KVFGISNLTK MLKAIDSIPD RELAVETLTW EAEWRNIDPS VGCYNEVMRL 120
KHENAVLRDV IRRCGNCSRL RLPPPYHPPL PPPKRHPANG DHHNNGGGNL MHDNEGINNN 180
NGNIENLINN GAVVAMVPQQ MINHPVNHGN LINGNRDHLS PMYMPPLENG NGGQRNIGHG 240
ALYLPNHIRR T
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ly0_A | 3e-17 | 33 | 123 | 7 | 96 | LOB family transfactor Ramosa2.1 |
| 5ly0_B | 3e-17 | 33 | 123 | 7 | 96 | LOB family transfactor Ramosa2.1 |
