PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010904690.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 468aa    MW: 51337.7 Da    PI: 7.7838
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010904690.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1301.2e-09183223545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  XP_010904690.1 183 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 223
                     7889************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-7172226No hitNo description
SMARTSM003389.4E-8179242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.438181225IPR004827Basic-leucine zipper domain
CDDcd147089.29E-21183235No hitNo description
PfamPF001701.1E-6183223IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-7183226No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
PfamPF141446.4E-34265340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MGSRKVGVGV EDVKEAKRGM PSFVSALPGA HHIETEGNSM HASRVSDLAA LEQSIGFRIE  60
EAVDLSRNPL FNPKSSGQSI ASDPLQFGAY SKALPSTDIS PASARVGPLT VPQQKGQQPN  120
LVSSSSGHIE NWGESTMADT SPRTDTSTDV DTDDKNQRLE QGQAAIAAAS DSSDKSKDKL  180
DQKTLRRLAQ NREAARKSRL RKKAYVQQLE NSRLKLTQLE QELQRARQQG IFISSSGDQS  240
HSMGGNGALA FDMEYARWLE EHNRQINELR AAVNSHASDN DLRTIVDSIM AHYDEIFRLK  300
GVAAKADVFH MLSGMWKTPA ERCFLWLGGF RSSELLKLLA NQLEPLTEQQ LVGICNLQQS  360
SQQAEDALSQ GMEALQQSLA ETLASGSLGP AGSSGNVANY MGQMAMAMGK LGTLESFLRQ  420
ADNLRQQTLQ QMIRILTTRQ SARALLAIHD YFSRLRALSS LWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019701724.20.0transcription factor TGA2.3
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2H3XPH40.0A0A2H3XPH4_PHODC; transcription factor TGA2.3-like isoform X2
STRINGXP_008786823.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-147bZIP family protein