![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_010904552.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
|
||||||||
Family | BES1 | ||||||||
Protein Properties | Length: 179aa MW: 20289.4 Da PI: 11.3765 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 84.6 | 2.7e-26 | 6 | 73 | 9 | 76 |
DUF822 9 wkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 kE+E+ k++ER+R i+ +i++GLR++Gny+l+ r+D+neV + L+r Gw+v +D tt++ s+ XP_010904552.1 6 PKEKEKMKLKERHRWVITMRILSGLRQHGNYNLRTRTDINEVTAPLARGVGWIVLPDDTTFPSRSSAS 73 59***********************************************************9655544 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.7E-24 | 6 | 74 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 179 aa Download sequence Send to blast |
MRRLWPKEKE KMKLKERHRW VITMRILSGL RQHGNYNLRT RTDINEVTAP LARGVGWIVL 60 PDDTTFPSRS SASSSRLLPG FHLSPSSLVY PSHLPYLHHL RLPQKPRRPR SPARRRLYSS 120 TAVINARDLM DDLDDLSSST STSKKPYLCD WMPTGPIGLG PFSGSGLGSG LYISKKNRA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020589209.1 | 4e-27 | beta-amylase 7-like |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP19695 | 6 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45880.1 | 1e-24 | beta-amylase 7 |