PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010559269.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 202aa MW: 23640.5 Da PI: 10.2069 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.1 | 2.5e-10 | 85 | 141 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +r +rk++NRe+ArrsR RK++ +e+ ++ L eN++L ++l ++++ ++ XP_010559269.1 85 RRKKRKISNRESARRSRMRKQKHLENMRTQLNRLRIENRELTNRLRYVVYHCQRARA 141 799***************************************999877777776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.6E-8 | 79 | 131 | No hit | No description |
SMART | SM00338 | 7.8E-12 | 81 | 145 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.404 | 83 | 146 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.97E-9 | 85 | 133 | No hit | No description |
Pfam | PF00170 | 2.9E-7 | 85 | 140 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 5.81E-17 | 86 | 130 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 88 | 103 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MMSTIPPVFS SEPGLANPFP AFETGFTPWD GSDIFSMFNS SEDEPVETKP GFEKHTSPQT 60 QAQTNSSSGS DDKSQNRFVS DMDERRKKRK ISNRESARRS RMRKQKHLEN MRTQLNRLRI 120 ENRELTNRLR YVVYHCQRAR AENDHLWLEH RILVEKLSNM RHVSMLRRMQ QASENATWPC 180 NDSTVVTAQQ NPSMLRNHVV DF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 84 | 105 | RRKKRKISNRESARRSRMRKQK |
2 | 97 | 104 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010559269.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010559269.1 | 1e-151 | PREDICTED: bZIP transcription factor 2 | ||||
TrEMBL | D7MXA7 | 2e-74 | D7MXA7_ARALL; Uncharacterized protein | ||||
STRING | XP_010559269.1 | 1e-150 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3338 | 26 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 4e-56 | basic leucine-zipper 5 |