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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010559145.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
NAC |
Protein Properties |
Length: 328aa MW: 37369.7 Da PI: 6.4407 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010559145.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 165 | 2.6e-51 | 11 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
+ppGfrFhPt+eel+++yL+kkv++ k++l +vi++vd++k+ePwd+++ k+ + +++wyfFs++dkky++g r+nrat++g+Wkatg+dk +
XP_010559145.1 11 VPPGFRFHPTEEELLQYYLRKKVSSVKIDL-DVIRDVDLNKLEPWDIQEmcKIGTaPQNDWYFFSHKDKKYPSGMRTNRATTAGFWKATGRDKII 104
69****************************.9***************953433333556**********************************99 PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+s +g+ +g++ktLvfykgrap+g+++dW+mheyrl
XP_010559145.1 105 HS-NGQRIGMRKTLVFYKGRAPHGQRSDWIMHEYRL 139
99.999****************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MNISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVSSVKIDL DVIRDVDLNK LEPWDIQEMC 60 KIGTAPQNDW YFFSHKDKKY PSGMRTNRAT TAGFWKATGR DKIIHSNGQR IGMRKTLVFY 120 KGRAPHGQRS DWIMHEYRLD DNISSDDTSV SFFVANITGE TSVEEGWVVC RTFKKKNLRK 180 TLTGGETTSS QMFNKETIER FPETMGRSGQ EELNIDPFRK HLTLESPSDA TSSYHDGPVN 240 SCHVRWEALD RFVASQLNGP TSYPTVDESH SDNDLALPTS FHGLNQLGLY QADLKQDFAP 300 DMELWNLAFG KTTSSLSDPL WHTSNGSE
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-48 | 8 | 177 | 14 | 167 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-48 | 8 | 177 | 14 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-48 | 8 | 177 | 14 | 167 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-48 | 8 | 177 | 14 | 167 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-47 | 8 | 177 | 17 | 170 | NAC domain-containing protein 19 |
3swm_B | 1e-47 | 8 | 177 | 17 | 170 | NAC domain-containing protein 19 |
3swm_C | 1e-47 | 8 | 177 | 17 | 170 | NAC domain-containing protein 19 |
3swm_D | 1e-47 | 8 | 177 | 17 | 170 | NAC domain-containing protein 19 |
3swp_A | 1e-47 | 8 | 177 | 17 | 170 | NAC domain-containing protein 19 |
3swp_B | 1e-47 | 8 | 177 | 17 | 170 | NAC domain-containing protein 19 |
3swp_C | 1e-47 | 8 | 177 | 17 | 170 | NAC domain-containing protein 19 |
3swp_D | 1e-47 | 8 | 177 | 17 | 170 | NAC domain-containing protein 19 |
4dul_A | 9e-48 | 8 | 177 | 14 | 167 | NAC domain-containing protein 19 |
4dul_B | 9e-48 | 8 | 177 | 14 | 167 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulate the secondary cell wall lignification of other tissues. {ECO:0000269|PubMed:16214898, ECO:0000269|PubMed:17237351, ECO:0000269|PubMed:17333250}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Gondolf VM, et al.
A gene stacking approach leads to engineered plants with highly increased galactan levels in Arabidopsis. BMC Plant Biol., 2014. 14: p. 344 [PMID:25492673] - Jaradat MR,Ruegger M,Bowling A,Butler H,Cutler AJ
A comprehensive transcriptome analysis of silique development and dehiscence in Arabidopsis and Brassica integrating genotypic, interspecies and developmental comparisons. GM Crops Food, 2014. 5(4): p. 302-20 [PMID:25523176] - Yuan Y,Teng Q,Zhong R,Ye ZH
TBL3 and TBL31, Two Arabidopsis DUF231 Domain Proteins, are Required for 3-O-Monoacetylation of Xylan. Plant Cell Physiol., 2016. 57(1): p. 35-45 [PMID:26556650] - Yang C, et al.
Transcription Factor MYB26 Is Key to Spatial Specificity in Anther Secondary Thickening Formation. Plant Physiol., 2017. 175(1): p. 333-350 [PMID:28724622] - Pascual MB, et al.
PpNAC1, a main regulator of phenylalanine biosynthesis and utilization in maritime pine. Plant Biotechnol. J., 2018. 16(5): p. 1094-1104 [PMID:29055073] - Liu C,Yu H,Li L
SUMO modification of LBD30 by SIZ1 regulates secondary cell wall formation in Arabidopsis thaliana. PLoS Genet., 2019. 15(1): p. e1007928 [PMID:30657769]
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