PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_010557479.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 239aa MW: 27124.6 Da PI: 9.5954 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.4 | 1.5e-13 | 168 | 211 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 ++ rrk+kNRe+A rsR+RK+a+ eL +k+ Le+eN++Lkke XP_010557479.1 168 RKLRRKIKNRESAARSRARKQAYHNELVTKISRLEEENMKLKKE 211 45799*************************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-11 | 162 | 211 | No hit | No description |
SMART | SM00338 | 8.1E-11 | 164 | 237 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.611 | 166 | 211 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 5.03E-16 | 168 | 217 | No hit | No description |
Pfam | PF00170 | 4.0E-11 | 168 | 211 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.38E-10 | 168 | 213 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 171 | 186 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 239 aa Download sequence Send to blast |
MGIQTIEMRE KSLHNLTLGE VEKHFGNSGK PLGSMSLDEL LEKVWAAEAR NSTGTDPLNM 60 ALLWSGKTVD QVWKEIRQNE RNRYDGDSGV KVEEREPVLG EVTLEVFLKH AQSLNPTVEI 120 DSSVDPTTPG SLRQQLSLSS SPSVNVFSGT ASSGRRRDME PIEKSIERKL RRKIKNRESA 180 ARSRARKQAY HNELVTKISR LEEENMKLKK EKEFDLMFPG VEYSSEPKYQ LRRTSSGSF |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | XP_010557479.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010557479.1 | 1e-175 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | W9R2G8 | 7e-77 | W9R2G8_9ROSA; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
STRING | XP_010557479.1 | 1e-174 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM16714 | 10 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-36 | ABA-responsive element binding protein 3 |