PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010557411.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 495aa MW: 54775.6 Da PI: 8.8747 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32 | 2.7e-10 | 189 | 230 | 4 | 45 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L XP_010557411.1 189 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQEL 230 6889*************************8766666655544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.6E-7 | 186 | 279 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.278 | 188 | 232 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.7E-7 | 189 | 230 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.9E-8 | 189 | 233 | No hit | No description |
SuperFamily | SSF57959 | 7.5E-7 | 190 | 232 | No hit | No description |
CDD | cd14708 | 2.84E-20 | 190 | 236 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 193 | 208 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.7E-29 | 272 | 346 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence Send to blast |
MANHRISDAT NHHQLPYSLL HGLSNPPPGF SNQEGSTTFD FGELEEAIVL QGVKFRNDEA 60 KPPLFAGGDS GRGAAATTLE MFPSWPMRAH QTPPRGNSKS RGESTDSGSA NFSGSQQTES 120 PMSSKKPSHG ISPELRRNNL MLNNSNNNTT NVSDASRTGL ASTSQTPAPP PRTADDKRKA 180 TTSGKQLDAK TLRRLAQNRE AARKSRLRKK AYVQQLESSR IKLTQLEQEL QRARSQGLLL 240 GGGCGPAGPG ITPGAAIFDM EYGRWLEEEN RHMSEIRTGV QAHLSDSDLR VTVDGYIAHF 300 DELFRLKAAA AKSDVFHLVT GTWMSPAERC FIWIAGFRPS DLIKMVVGQM ELVTEQQMMG 360 IYSLQHSSQQ AEEALSQGLE QLQHSLIDHI SSLPLLDDFH QMALAIAKLS NLEGFVRQAD 420 NLRQQTIHQL RRILTVRQAA RCFLIIGEYY GRLRALSSLW LSRPREGLIS DEAASCQTTT 480 DLQMVQSSRN HFSNF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00131 | DAP | Transfer from AT1G08320 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010557411.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010557409.1 | 0.0 | PREDICTED: transcription factor TGA2.2 isoform X1 | ||||
Refseq | XP_010557410.1 | 0.0 | PREDICTED: transcription factor TGA2.2 isoform X1 | ||||
Refseq | XP_010557412.1 | 0.0 | PREDICTED: transcription factor TGA2.2 isoform X1 | ||||
Swissprot | Q93XM6 | 0.0 | TGA9_ARATH; Transcription factor TGA9 | ||||
TrEMBL | A0A1J3D5K8 | 0.0 | A0A1J3D5K8_NOCCA; TGACG-sequence-specific DNA-binding protein TGA-2.1 | ||||
STRING | XP_010557409.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 0.0 | bZIP family protein |
Publications ? help Back to Top | |||
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