PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010557077.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 424aa MW: 46506.6 Da PI: 6.6379 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32 | 2.7e-10 | 225 | 283 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l+ e+ XP_010557077.1 225 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTVEN 283 9********************************************99998887777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.3E-16 | 221 | 285 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.772 | 223 | 286 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-10 | 225 | 279 | No hit | No description |
SuperFamily | SSF57959 | 9.14E-11 | 225 | 276 | No hit | No description |
Pfam | PF00170 | 1.3E-8 | 225 | 277 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 2.47E-24 | 226 | 275 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence Send to blast |
MDKEKSPAPG GGLPPPSGGY SAFSPNGSSF GMKTESSFPP LVPSSSSDIG AFGHGSDSSR 60 FSHDISRMPD NPPKNLGHRR AHSEILTLPD DLSFDSDLGV VGGADGPSFS DETEEDLLFM 120 YLDMDKFNSS ATSSSQMGDP SEHAGRIEGT QTGSANLATS SNPETMLAGS SERPRIRHQH 180 SQSMDGSTTI KPEMLMSGAE EASPSDPKKA MSAAKLAELA LIDPKRAKRI WANRQSAARS 240 KERKMRYIAE LERKVQTLQT EATSLSAQLT LLQRDTNGLT VENNELKLRL QTMEQQVHLQ 300 DALNDALKEE IQHLKVLTGP VVPNGASMMN YGSYGSNQQL YHNNQSMHTL LAAQQFQQLQ 360 IHSQKQQQQQ QQQFQFQQQQ LHHLRQQEQQ SGFADLRRSM PSPSQKESGS SSDLKAPKMK 420 DKGI |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00126 | DAP | Transfer from AT1G06070 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010557077.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010557077.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_010557078.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_010557079.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 1e-175 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A2P2M991 | 0.0 | A0A2P2M991_RHIMU; Transcription factor RF2a | ||||
STRING | XP_010557076.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 0.0 | bZIP family protein |
Publications ? help Back to Top | |||
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