 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010556110.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
| Family |
NAC |
| Protein Properties |
Length: 262aa MW: 29174.7 Da PI: 8.8441 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010556110.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 164.8 | 3.1e-51 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+evd+++++PwdLp +e+e yfFs+r+ ky++g+r+nrat sgyWkatg dk+v+++
XP_010556110.1 14 LPPGFRFHPTDEELVVQYLKRKVLSCPLPA-SIIPEVDVCRADPWDLP---GDSEQERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKRVVAA 104
79****************************.89***************...3467899*********************************9998 PP
NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
++++vglkktLvfy+g+ p+g++tdW+mheyrl
XP_010556110.1 105 rGNTVVGLKKTLVFYRGKPPHGSRTDWIMHEYRL 138
56777***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MEKLNFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVLSCP LPASIIPEVD VCRADPWDLP 60
GDSEQERYFF STREAKYPNG NRSNRATGSG YWKATGIDKR VVAARGNTVV GLKKTLVFYR 120
GKPPHGSRTD WIMHEYRLSS SPPSSPSPEE NWVLCRIFLK KRSSGKSEDD VVPCSNGEGN 180
SQISLDNVIS SSNDGDNQSG CRKKSRPVLI DFMRKERSAD MNLAPNSPSG SSGVTTEVSS 240
DESDGVDQSS CCNSFPYFRR KL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 9e-52 | 12 | 166 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 9e-52 | 12 | 166 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 9e-52 | 12 | 166 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 9e-52 | 12 | 166 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 9e-52 | 12 | 166 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 9e-52 | 12 | 166 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 9e-52 | 12 | 166 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 9e-52 | 12 | 166 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 9e-52 | 12 | 166 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 9e-52 | 12 | 166 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 9e-52 | 12 | 166 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 9e-52 | 12 | 166 | 18 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 9e-52 | 12 | 166 | 15 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 9e-52 | 12 | 166 | 15 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |
