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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010554818.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
MIKC_MADS |
Protein Properties |
Length: 266aa MW: 30277.9 Da PI: 5.6529 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010554818.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 81.5 | 5.6e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
kri+n r v fskRrng++KKA ELS+LCdaevavi+fsstgk+y++ss
XP_010554818.1 9 KRIDNVNSRLVRFSKRRNGLMKKARELSILCDAEVAVIVFSSTGKVYDFSS 59
79***********************************************96 PP
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2 | K-box | 57.8 | 4.6e-20 | 98 | 183 | 14 | 99 |
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99
+q++++ Lk+e+e L + ++ G +L+ Ls++eL +Le+qL+++l +i+++K+++ll+qie+++ +ek++ een++Lrk+le
XP_010554818.1 98 IDASQEDSDSLKSELERLHLSYERMNGRELDGLSFQELLSLENQLNEALLNIKDRKTQVLLNQIERSRLQEKKALEENERLRKQLE 183
567899*****************************************************************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MGRGKTEIKR IDNVNSRLVR FSKRRNGLMK KARELSILCD AEVAVIVFSS TGKVYDFSSS 60 SMHQTLSRYG YSSVSSDHWE QPQLLQHQQP HPSLFQDIDA SQEDSDSLKS ELERLHLSYE 120 RMNGRELDGL SFQELLSLEN QLNEALLNIK DRKTQVLLNQ IERSRLQEKK ALEENERLRK 180 QLEMFEGSSE PLELTAVNTE LHILASFPLL GRGMEGKSSS LDDDNDSDDH HSDTTLQLGL 240 PSEYNRKKKI PKIEPACDSS GSQVCL
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in the negative regulation of flowering, probably through the photoperiodic pathway. Prevents premature flowering. Downstream regulator of a subset of the MIKC* MADS-controlled genes required during pollen maturation. {ECO:0000269|PubMed:17521410, ECO:0000269|PubMed:18034896, ECO:0000269|PubMed:18799658}. |