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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010552948.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
NAC |
Protein Properties |
Length: 568aa MW: 63504.6 Da PI: 4.3524 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010552948.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 169.3 | 1.3e-52 | 9 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
l+pGfrFhPtdeelv +yLk+k+ +k++++ ++i+ +diyk+ePwdLp k k+k+++ ewyfFs dkky +g+++nrat++gyWk+tgkd+e+
XP_010552948.1 9 LAPGFRFHPTDEELVRYYLKRKICNKPFRF-DAISVIDIYKSEPWDLPdKsKLKSRDLEWYFFSVLDKKYGNGSKTNRATEKGYWKTTGKDREIR 102
579**************************9.99**************95347777888************************************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + ++vg+kktLv++kgrap+ge+t+Wvmheyrl
XP_010552948.1 103 N-GPRVVGMKKTLVYHKGRAPRGERTNWVMHEYRL 136
9.999****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009644 | Biological Process | response to high light intensity |
GO:0009962 | Biological Process | regulation of flavonoid biosynthetic process |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 568 aa
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to blast |
MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK ICNKPFRFDA ISVIDIYKSE PWDLPDKSKL 60 KSRDLEWYFF SVLDKKYGNG SKTNRATEKG YWKTTGKDRE IRNGPRVVGM KKTLVYHKGR 120 APRGERTNWV MHEYRLVDDE LGKAGVAQDA YVLCRIFQKS GSGPKNGEQY GAPFIEEEWE 180 DDEMVFVPDQ DAMSDEGLAV DDNDVYVDMD DIDQKPGNDE IFDAIPLPSN FYHGESSNNI 240 ESGNYSESGN YIQPGNYVDT SCYFAQPTDS SEEDQKPIIR TGEIQPVLVL PDEQIDCDVQ 300 EENTDNFQTP NNIFSAETSY SGIPDDNYLL QEPLMDPDNN LPLNDGLYLE TDDLSLTNHD 360 SFNFEDYLTF FDGDDEFTPQ LTFNASQLVG TEGSVPHVEG ITEKAVPEVL EKEASTSKHV 420 MEEKDKSEAS CSRQDPDALK FESDSKYPFL KKASEMLGAI PAPPAFASEF PTKVAAMHLH 480 SAAQSSGSVH VTAGMIRISN MTIAAGSGMD WSYGKNGSLN VVLSLGLVEQ TETGKLGRTL 540 SRAMLIFVCF WVLILSVSFK VGTFVSAR
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 9e-46 | 8 | 165 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-46 | 8 | 165 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-46 | 8 | 165 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-46 | 8 | 165 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-46 | 8 | 165 | 19 | 174 | NAC domain-containing protein 19 |
3swm_B | 9e-46 | 8 | 165 | 19 | 174 | NAC domain-containing protein 19 |
3swm_C | 9e-46 | 8 | 165 | 19 | 174 | NAC domain-containing protein 19 |
3swm_D | 9e-46 | 8 | 165 | 19 | 174 | NAC domain-containing protein 19 |
3swp_A | 9e-46 | 8 | 165 | 19 | 174 | NAC domain-containing protein 19 |
3swp_B | 9e-46 | 8 | 165 | 19 | 174 | NAC domain-containing protein 19 |
3swp_C | 9e-46 | 8 | 165 | 19 | 174 | NAC domain-containing protein 19 |
3swp_D | 9e-46 | 8 | 165 | 19 | 174 | NAC domain-containing protein 19 |
4dul_A | 9e-46 | 8 | 165 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 9e-46 | 8 | 165 | 16 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity). Transcripition activator associated with the induction of genes related to flavonoid biosynthesis and required for the accumulation of anthocyanins in response to high light stress (PubMed:19887540). Plays a role in the regulation of 20S and 26S proteasomes in response to high light stress (PubMed:21889048). {ECO:0000250|UniProtKB:Q949N0, ECO:0000269|PubMed:19887540, ECO:0000269|PubMed:21889048}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By exposure to high light (PubMed:19887540). Induced by heat and methyl methanesulfonate (MMS) treatment (PubMed:17158162). {ECO:0000269|PubMed:17158162, ECO:0000269|PubMed:19887540}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Liang M, et al.
Subcellular Distribution of NTL Transcription Factors in Arabidopsis thaliana. Traffic, 2015. 16(10): p. 1062-74 [PMID:26201836] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis. Plant Physiol., 2015. 169(2): p. 1275-91 [PMID:26304848] - Gladman NP,Marshall RS,Lee KH,Vierstra RD
The Proteasome Stress Regulon Is Controlled by a Pair of NAC Transcription Factors in Arabidopsis. Plant Cell, 2016. 28(6): p. 1279-96 [PMID:27194708] - Tang Y,Zhao CY,Tan ST,Xue HW
Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078. PLoS Genet., 2016. 12(8): p. e1006252 [PMID:27529511]
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