PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010552516.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 429aa MW: 44791 Da PI: 10.1828

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010552516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.4	8.7e-15	352	405	5	58
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +r+rr++kNRe+A rsR+RK+a++ eLe ++++L++eN++L+k+ e+ ++ ++ XP_010552516.1 352 RRQRRMIKNRESAARSRARKQAYTMELEAEIAKLKEENQELRKKQAEMMEMQKN 405 79****************************************999988888665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.2E-13	348	412	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.346	350	401	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.63E-10	352	401	No hit	No description
Pfam	PF00170	2.0E-12	352	405	IPR004827	Basic-leucine zipper domain
CDD	cd14707	7.21E-28	352	406	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.2E-14	352	401	No hit	No description
PROSITE pattern	PS00036	0	355	370	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence Send to blast
MASNLNFKNF GYEPPGDSGG GGGGGGGNGG RNGPPASFPL TRQGSIYSLT FDEFQSSLGK 60 DFGSMNMDEL LKNIWSAEET QAMASTGAVG GGGGNGGRGQ GGQDGLQRQG SLTLPRTLSQ 120 KRVDEVWKDI SKEYTAVNNG GGGSNLPQRQ QTLGEVTLEE FLVRAGVVRE ETQAAGKANK 180 GGYFRDSSGS VGNTAVSGDG FAGLMGNLGP ESGNQMSGQS SMLPVNVNGA RSSNQHQEPK 240 QPAFGYGTQM PLLGGQPNSH GIRGGLMGLT DRCLGGNAGL VQVQGPGLMT GGGLGLAGAV 300 GIGGASPVTP LSTDGTGKSN GDTSSVSPLP YMFSGGMRGR KSSGAVEKVV ERRQRRMIKN 360 RESAARSRAR KQAYTMELEA EIAKLKEENQ ELRKKQAEMM EMQKNQAMEM MSLQGGPKKR 420 LRRTQTGPW

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence Send to blast

MASNLNFKNF GYEPPGDSGG GGGGGGGNGG RNGPPASFPL TRQGSIYSLT FDEFQSSLGK  60
DFGSMNMDEL LKNIWSAEET QAMASTGAVG GGGGNGGRGQ GGQDGLQRQG SLTLPRTLSQ  120
KRVDEVWKDI SKEYTAVNNG GGGSNLPQRQ QTLGEVTLEE FLVRAGVVRE ETQAAGKANK  180
GGYFRDSSGS VGNTAVSGDG FAGLMGNLGP ESGNQMSGQS SMLPVNVNGA RSSNQHQEPK  240
QPAFGYGTQM PLLGGQPNSH GIRGGLMGLT DRCLGGNAGL VQVQGPGLMT GGGLGLAGAV  300
GIGGASPVTP LSTDGTGKSN GDTSSVSPLP YMFSGGMRGR KSSGAVEKVV ERRQRRMIKN  360
RESAARSRAR KQAYTMELEA EIAKLKEENQ ELRKKQAEMM EMQKNQAMEM MSLQGGPKKR  420
LRRTQTGPW

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010552516.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010552516.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X3
Swissprot	Q9M7Q4	1e-155	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A061FIW7	1e-157	A0A061FIW7_THECC; Abscisic acid responsive elements-binding factor 2 isoform 1
STRING	XP_010552514.1	0.0	(Tarenaya hassleriana)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-135	abscisic acid responsive elements-binding factor 2

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]