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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010552401.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
NAC |
Protein Properties |
Length: 326aa MW: 37152.3 Da PI: 7.4374 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010552401.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 156.6 | 1e-48 | 45 | 177 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95
pGfrFhPtd+elv +yL +kv++k++++ ++ik+vdiyk++Pwd+p + +++e+e yfF+kr +ky+++ r+nr+t sg+Wkatg dk+v+s
XP_010552401.1 45 PGFRFHPTDDELVGFYLLRKVQKKPIKM-DIIKHVDIYKFDPWDIP-RSSNTENESYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSDsh 137
9***************************.99***************.5556789**************************************855 PP
NAM 96 ...kgel......vglkktLvfykgrapkgektdWvmheyrl 128
+ + +glkktLv+y+g+a kg+kt+W+mhe+rl
XP_010552401.1 138 kaaG--DqsnsviIGLKKTLVYYRGSAGKGTKTEWMMHEFRL 177
5550..0555666***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MIRQKISSES SEKDPTAMLI GDKIVDHINR GSEEEEDDGD VFPLPGFRFH PTDDELVGFY 60 LLRKVQKKPI KMDIIKHVDI YKFDPWDIPR SSNTENESYF FCKRGRKYRN SIRPNRVTGS 120 GFWKATGIDK PVYSDSHKAA GDQSNSVIIG LKKTLVYYRG SAGKGTKTEW MMHEFRLPTS 180 SDNVNNPNST SSSQEAEVWT LCRIFKRNVS SRKYTPDWRE LASSKRVKQH QPHTSFHQEA 240 YINFGDTDSA DVIPPHINEK NVVANKTNDG NMFHYANQLS ATHAVTTVLP AGPVPEFSND 300 NHQEFSYGNW DELRSMVDFA FGQSSS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-44 | 45 | 213 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-44 | 45 | 213 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-44 | 45 | 213 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-44 | 45 | 213 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-44 | 45 | 213 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-44 | 45 | 213 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-44 | 45 | 213 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-44 | 45 | 213 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-44 | 45 | 213 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-44 | 45 | 213 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-44 | 45 | 213 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-44 | 45 | 213 | 22 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-44 | 45 | 213 | 19 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-44 | 45 | 213 | 19 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
Publications
? help Back to Top |
- Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins. Plant Signal Behav, 2016. 11(6): p. e1181245 [PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling. Nat Plants, 2016. 2: p. 16013 [PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Front Plant Sci, 2017. 8: p. 214 [PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways. Plant J., 2017. 92(6): p. 1106-1120 [PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13. Front Plant Sci, 2017. 8: p. 2118 [PMID:29326734]
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