PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010552219.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 304aa    MW: 34013.5 Da    PI: 6.6323
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010552219.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35e-11177222550
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                     kr +r   NR +A+rsR RK+++i eLe+ v +L+ae ++L  ++ 
  XP_010552219.1 177 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSELSPRVA 222
                     8999*********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-14173237IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.829175227IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.61E-11177231No hitNo description
PfamPF001702.5E-9177222IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.6E-12177228No hitNo description
CDDcd147037.81E-24178228No hitNo description
PROSITE patternPS000360180195IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MAQLPPKIPN MSPHHWPDFS SQKLPSLAAA GQNPSWVDDF LDFSAARRGS HRRSISDSIA  60
FLEAPVSVSG HHNHHPSFDR FDDDQFISMF SDDPPDNDNN NVGSSSNTSS PSDHNSVNDE  120
TKEPPSDYHR KDMTHHIGGS GGEAEEVQSQ CKTEPQEVPP LNSDSTLNSG NRIFDPKRVK  180
RILANRQSAQ RSRVRKLQYI SELERSVTSL QAEVSELSPR VAFLDHQRLL LNVDNSALKQ  240
RIAALAQDKI FKDAHQEALK REIERLRTVY HQQKTKKMEN ACQSPAAADV KPSGETEQLL  300
NALN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010552219.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010552219.10.0PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K41e-138BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A178VLL51e-135A0A178VLL5_ARATH; BZIP61
STRINGXP_010552219.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17532777
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-127bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]