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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010551268.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
CO-like |
Protein Properties |
Length: 424aa MW: 46938.4 Da PI: 5.1367 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010551268.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 25.6 | 2.5e-08 | 13 | 56 | 3 | 40 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
+r C+ + + +++++C ++ +lC+ C + H+ H++v
XP_010551268.1 13 ARACDSCVKRRARWYCAADDAFLCQVCDGSVHSAnplarrHERV 56
578*****************************657888888876 PP
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2 | CCT | 68 | 2.4e-23 | 368 | 411 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a
XP_010551268.1 368 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 411
9*****************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 424 aa
Download sequence Send
to blast |
MKSLSNAVGA KTARACDSCV KRRARWYCAA DDAFLCQVCD GSVHSANPLA RRHERVRLKS 60 ASSVPPPGPA TWHHGFARKA RTPRGGGGRK KTNHRAIFHD LVPEISAEDQ TENYEEEQLI 120 CQVPVLDHPM AESNTSFPLP VRMKFADIKD KDDDQDNAES CLNGFFPSDM ELAEFAADVE 180 TLLGHGLETE SFAMEELGLG YGSLSCGRSS SMVLKVEEEE EKEGTTTELS CDRGDVDVTP 240 FELSFDYESH KTCAEEEEEE EDDKQNVINF NTGEGENETS GSGRSTIKDD EEEKGKGKKT 300 KILMLRLDYE SVISSWGGQG PPWTAGEPPE LDLKNDSWPI SMGEVNGGQY GSGICGVGLT 360 MAMGDVGREA RVSRYREKRR TRLFSKKIRY EVRKLNAEKR PRMKGRFVKR ASLSALASSI 420 PGAY
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 378 | 394 | RRTRLFSKKIRYEVRKL |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G25440.1 | 1e-138 | B-box type zinc finger protein with CCT domain |