PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010550922.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 362aa MW: 38579.8 Da PI: 9.2179 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.7 | 3.4e-15 | 183 | 237 | 4 | 58 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 kr rr+ +NRe+ArrsR+RK+a + eLe+ v e+ +eN+ L k+l ++++ + XP_010550922.1 183 AKRVRRMLSNRESARRSRRRKQAHLTELETQVSEMRTENSNLLKRLTDITQTFNN 237 69*******************************************9999988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.5E-17 | 177 | 244 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.266 | 182 | 233 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.2E-11 | 183 | 235 | No hit | No description |
Pfam | PF00170 | 9.6E-13 | 183 | 234 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.04E-11 | 184 | 234 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 187 | 202 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 9.6E-27 | 251 | 358 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence Send to blast |
MDRVFSGEIW PAPTAKDTVD AVSGDTDGTA RLNRSASEWA FQRFIQESSS SSAAGAGDIT 60 AAYGSSDAGP PSPCLPVDSA EYRAYLKSKL NLACAAVAMK RASFTKPQET SGRASSGAQA 120 SSASEQASPA SSKVNEVGML SCAAAPKKPS VPGKSTTSGS ELSGDEEADG ETETTGNTDP 180 LNAKRVRRML SNRESARRSR RRKQAHLTEL ETQVSEMRTE NSNLLKRLTD ITQTFNNAAV 240 ENRVLKANVE TLRAKVKMAE ERVKRITGLN PMLQAIPDIS TVSVPSFNGS LSETSSDDPG 300 HRIFRHSPNN SLATSNTDNT AIEISSATSK ALTACKMERT ASLHRVASLE HLQKRISSAS 360 QP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 196 | 203 | RRSRRRKQ |
2 | 198 | 203 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in controlling responses to starvation (PubMed:26263501). BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000269|PubMed:26263501, ECO:0000269|PubMed:29348240}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010550922.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Strongly repressed by glucose. {ECO:0000269|PubMed:18841482}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010550922.1 | 0.0 | PREDICTED: basic leucine zipper 63 isoform X1 | ||||
Swissprot | B9DGI8 | 1e-107 | BZP63_ARATH; Basic leucine zipper 63 | ||||
TrEMBL | E4MXL8 | 1e-114 | E4MXL8_EUTHA; mRNA, clone: RTFL01-34-D15 | ||||
TrEMBL | V4KQP7 | 1e-114 | V4KQP7_EUTSA; Uncharacterized protein | ||||
STRING | XP_010550922.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6846 | 27 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 2e-88 | bZIP family protein |
Publications ? help Back to Top | |||
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