 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_010550131.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 237aa MW: 27126.9 Da PI: 4.4196 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010550131.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 65.9 | 5.5e-21 | 65 | 118 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq++ Le+ Fe ++++ e+++eLAkklgL+ rqV vWFqNrRa++k
XP_010550131.1 65 KKRRLTPEQVNLLEKSFEAENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWK 118
5678*************************************************9 PP
|
| 2 | HD-ZIP_I/II | 132.1 | 2.1e-42 | 64 | 156 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrl+ eqv+lLE+sFe+e+kLeperK+ela++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ ++ ke+++L++e+++
XP_010550131.1 64 EKKRRLTPEQVNLLEKSFEAENKLEPERKTELAKKLGLQPRQVAVWFQNRRARWKTKQLETDYDLLKSTYDNLLADYQSTVKENDKLKSEVAS 156
69**************************************************************************************99875 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MESNKFFFDP SACHGNMLFL GNRNPVIQGG RSVISMEETS KRRPFFSSPE DLYDEEYYDE 60
QLPEKKRRLT PEQVNLLEKS FEAENKLEPE RKTELAKKLG LQPRQVAVWF QNRRARWKTK 120
QLETDYDLLK STYDNLLADY QSTVKENDKL KSEVASLTEK LQGREEAGKE PPGEGEGPDQ 180
KAQEARLSTG SGVVDYEDAP HSCDSYFPIH SEEDDISDDN LFVAADGEEA LAWWSCA
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 112 | 120 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:8535134}. |
