 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010549363.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
| Family |
NAC |
| Protein Properties |
Length: 311aa MW: 35191.5 Da PI: 9.2997 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010549363.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 107.8 | 1.3e-33 | 75 | 216 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk...... 79
lp+G+rF+P+d e++ +L++kv+++k ++ e +++ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+++
XP_010549363.1 75 LPAGVRFDPSDREIL-MHLEAKVSSDKrklhplID--EfipTLEGEnGICYTHPEKLP-GVRKDGQVRHFFHRPSKAYTTGTRKRRKVStdergh 165
799***********9.89*****999956644322..22222333336**********.666777888******************733345444 PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ +W++tgk+++v s +g+l+g kk+Lv+y gr++k+ekt+Wvmh+y+l
XP_010549363.1 166 ETRWHKTGKTRPVSSGQGSLKGFKKILVLYtnYGRQRKPEKTSWVMHQYHL 216
788***************************66589**************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 311 aa
Download sequence Send
to blast |
MNWSDGSEDN YDLDLERAIS IDHPLMVASK FRSQSRITVG PNTGKSHNTI TCPSCGHKIH 60
RQQDQVGIIK DLPSLPAGVR FDPSDREILM HLEAKVSSDK RKLHPLIDEF IPTLEGENGI 120
CYTHPEKLPG VRKDGQVRHF FHRPSKAYTT GTRKRRKVST DERGHETRWH KTGKTRPVSS 180
GQGSLKGFKK ILVLYTNYGR QRKPEKTSWV MHQYHLGHSE DEKDGELVLS KVFYQTQPRQ 240
CGSSMEAKTK GFAPVDPRNY SEIDGLGFED GGQEGNNREI DQRQVIHELV VREGDGSCSL 300
LRFTSDASKG K
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers. Is a direct target of SND1. {ECO:0000269|PubMed:18952777}. |
