PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010548883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 384aa MW: 43218 Da PI: 8.4214 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.7 | 2.5e-08 | 244 | 290 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae ++ el+ l+++ l +e+ XP_010548883.1 244 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELDFLNQQNLILSMEN 290 89***********************************9998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0036 | 235 | 292 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 4.81E-14 | 239 | 283 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.8E-6 | 244 | 286 | No hit | No description |
SuperFamily | SSF57959 | 4.84E-6 | 244 | 286 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence Send to blast |
MATSKQSQNV RNLIYPGKHA LLPPKIPFPS VSASYAEYIP SEFNGSKPVR KPREGKGHHQ 60 RTSSESYLTE EQPSWLDDLL DEPETPASRS GHRRSSSDSF AYLDAVNASN VSLTLNDFKY 120 RSVVPAPQRG IQKFDRSQKA QDASLYSDAG FVKQDNRLWN NLIASGAHPG LLPSTRESIG 180 RQNIGALAMS QEEDTVTCSP AETKNSAESL SHNLNKVSPE RRIPNPFPVI SEADNTKHSK 240 QQFAQRSRVR KLQYIAELER NVQALQAEGS EVSAELDFLN QQNLILSMEN KSLKQRLESL 300 AHEKLIKHLE QEVLEREIGR LRRALYQPQQ EQELPQKPLT NHRRATSKDL DSQFANLSLK 360 SNDLSATHDS TSTTEELRER RGEG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010548883.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010548883.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598 isoform X1 | ||||
Refseq | XP_010548884.1 | 0.0 | PREDICTED: uncharacterized protein At4g06598 isoform X1 | ||||
TrEMBL | D7KY87 | 1e-159 | D7KY87_ARALL; Predicted protein | ||||
STRING | XP_010548883.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3360 | 24 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-147 | bZIP family protein |