PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010548260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 343aa MW: 38054.6 Da PI: 8.2835 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47 | 5.8e-15 | 272 | 321 | 3 | 52 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +++r +r++kNRe+A rsR+RK+a++ eLe ++++L+aeN +Lk e e+ XP_010548260.1 272 SDRRHKRMIKNRESAARSRARKQAYTNELELEIANLQAENARLKGEQEQQ 321 789*****************************************887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.3E-11 | 270 | 331 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.806 | 272 | 320 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.0E-12 | 273 | 320 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-13 | 274 | 322 | No hit | No description |
SuperFamily | SSF57959 | 1.63E-10 | 274 | 321 | No hit | No description |
CDD | cd14707 | 7.76E-26 | 274 | 328 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 277 | 292 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence Send to blast |
MDFFYLLSLS LSLSVSLPLD PTIIPEMTNE REEALLCSVL SRLLHYHNIR LSLSPSLSVL 60 YKTVDTQERT QLLLLFCFPM LSSAEEQNSH RVLLSDSNKN KSLDRVSSST SSPSSSTSSS 120 SLPISQAQFK PQPAMEEVWK DINLASIHHH GQIPHDPRVR TQHPNSILQD FLNRPQSHDP 180 PPTRLSMGSS SNGDTSTVTA LYGSPLPPPA TVLSLNSSAG FEFLDNPDPH LQNHPHLSSN 240 ISSLTTPFEA LASAGQFGFY GKKRGQDSDS SSDRRHKRMI KNRESAARSR ARKQAYTNEL 300 ELEIANLQAE NARLKGEQEQ QRMAAASQLP KKNTLQRTST APF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010548260.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010548260.1 | 0.0 | PREDICTED: protein FD-like isoform X2 | ||||
Swissprot | Q84JK2 | 6e-92 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A1J3C804 | 1e-94 | A0A1J3C804_NOCCA; Protein FD (Fragment) | ||||
STRING | XP_010548259.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-89 | bZIP family protein |