PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010547565.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 203aa    MW: 23737.6 Da    PI: 9.8361
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010547565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.23.2e-1289147563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     +re+rk++NRe+ArrsR RK++ +e+L++    L  eN++L++++     ++++ ++e+
  XP_010547565.1  89 RREKRKISNRESARRSRMRKQQHLENLRRQLNRLRIENRELANRIRYVMYHCQRARTEN 147
                     79*******************************************99999999877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-1385149IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.64587150IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.3E-888141No hitNo description
SuperFamilySSF579599.64E-1089138No hitNo description
PfamPF001703.6E-989147IPR004827Basic-leucine zipper domain
CDDcd147024.38E-1890141No hitNo description
PROSITE patternPS00036092107IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MMSTIYPVFS SEPGFANQFP AFETGFTPWD ASDLFSIFNS SVGEPVETKP DFEKPTSDQT  60
QSQSNSSSSS DKSQNRFVSD LFASDIGERR EKRKISNRES ARRSRMRKQQ HLENLRRQLN  120
RLRIENRELA NRIRYVMYHC QRARTENDRL RLEHRILVQK LSNIRQVLIS WQIQQTPTYA  180
TWPCNDSTVM TEQDPSIISN LVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101108RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010547565.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010547565.11e-149PREDICTED: ocs element-binding factor 1-like
TrEMBLD7MXA71e-73D7MXA7_ARALL; Uncharacterized protein
STRINGXP_010547565.11e-149(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33382665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.18e-42basic leucine-zipper 5