PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010546230.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 184aa MW: 21537 Da PI: 8.2962

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010546230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.5	7.1e-14	75	133	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr+rr+ +NRe+ArrsR RKk++ieeL+ v++L N+ L +++ +l + + +e+ XP_010546230.1 75 KRARRMVSNRESARRSRMRKKKQIEELQLQVEQLVMWNHHLSEKVISLLESNHQILQEN 133 9*******************************************999988888887776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.3E-12	71	135	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.001	73	136	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.3E-13	75	133	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.19E-11	75	127	No hit	No description
Gene3D	G3DSA:1.20.5.170	4.1E-12	75	131	No hit	No description
CDD	cd14702	1.14E-14	76	127	No hit	No description
PROSITE pattern	PS00036	0	78	93	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence Send to blast
MEPNDRPSNC FNLLQGNPSQ NNQLYSLFLP DTEFHTQLHS VSPDTSTLSN NRSNADPNRE 60 TVYNHGHQQS IVDEKRARRM VSNRESARRS RMRKKKQIEE LQLQVEQLVM WNHHLSEKVI 120 SLLESNHQIL QENAQLKEKV SSFHILTADM LPPVRNLEDI NCREMNHERA EPSNRSNNLR 180 PHKT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010546230.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010546230.1	1e-133	PREDICTED: basic leucine zipper 43
TrEMBL	V4KWU6	2e-61	V4KWU6_EUTSA; Uncharacterized protein
STRING	XP_010546230.1	1e-132	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6185	25	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	2e-57	basic leucine-zipper 70