 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010545485.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
| Family |
LBD |
| Protein Properties |
Length: 249aa MW: 28451.7 Da PI: 9.2968 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010545485.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 84.3 | 1.7e-26 | 83 | 182 | 2 | 100 |
DUF260 2 CaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
Ca+C+ +rr+C C++ap fp + ++++ ++klFG+s++++++ ++ +e ++++++sl+ e++ara+dPv G +g+++ l++q++ +++l+
XP_010545485.1 83 CAVCRQQRRRCDVTCPYAPFFPPHCFADYQKARKLFGTSTIMRMMGEVgAPELKRALADSLLAEGRARAEDPVMGGFGIVRMLRWQIQFYQTHLE 177
************************************************66777*****************************************9 PP
DUF260 96 llkee 100
++++e
XP_010545485.1 178 QTRRE 182
99876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 249 aa
Download sequence Send
to blast |
MTGKQIRDIL QWLLFVNLSR KIQDDILRRL HSIVTGIGNL MFPETLNGKG WMLNQPIRIG 60
IKFNIRPKTV MENQQNTVVR LNCAVCRQQR RRCDVTCPYA PFFPPHCFAD YQKARKLFGT 120
STIMRMMGEV GAPELKRALA DSLLAEGRAR AEDPVMGGFG IVRMLRWQIQ FYQTHLEQTR 180
REIAARKEAN ARERTGMPPE YKGDGLSTDI DLEAGNTELR LFEPSWLEHG PDRTAETAPA 240
DDVSNPQSH
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5ly0_A | 2e-13 | 83 | 183 | 12 | 111 | LOB family transfactor Ramosa2.1 |
| 5ly0_B | 2e-13 | 83 | 183 | 12 | 111 | LOB family transfactor Ramosa2.1 |
