PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

ERF

Protein Properties

Length: 232aa MW: 25069 Da PI: 7.1756

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010544612.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	58.1	2.2e-18	54	104	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g XP_010544612.1 54 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 104 59***998.******9...336**********************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00018	8.55E-19	54	113	No hit	No description
SMART	SM00380	1.3E-35	55	118	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	1.7E-30	55	113	IPR001471	AP2/ERF domain
Pfam	PF00847	2.0E-11	55	104	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	1.18E-19	55	112	IPR016177	DNA-binding domain
PROSITE profile	PS51032	21.838	55	112	IPR001471	AP2/ERF domain
PRINTS	PR00367	5.5E-9	56	67	IPR001471	AP2/ERF domain
PRINTS	PR00367	5.5E-9	78	94	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence Send to blast
MELGSRCLSM VKKAQQETAK RVSSPSSSSS SSLCSSPSPS LSSSSSSSMC KNKKKYKGVR 60 MRSWGSWVSE IRAPNQKTRI WLGSYSTAEA AARAYDAALL CLKGSSANLN FPEISSSLCI 120 PSTNHENTVM SPKSIQRVAA AAAANSSIIP ASPMASSSSS SPADDQYDVV SMTHSLGTYN 180 EQTNESWWYN NCFDGIESPD QFMLFNGVSP FLTPTIDDFL EEGGDIRLWS FC

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1gcc_A	6e-15	54	112	1	60	ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A	1e-14	55	113	14	73	Ethylene-responsive transcription factor ERF096
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010544612.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010544612.1	1e-169	PREDICTED: ethylene-responsive transcription factor ERF014-like
Swissprot	Q9LPE8	1e-51	ERF14_ARATH; Ethylene-responsive transcription factor ERF014
TrEMBL	A0A1J3G598	1e-53	A0A1J3G598_NOCCA; Uncharacterized protein (Fragment)
STRING	XP_010544612.1	1e-169	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM14409	18	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G44830.1	2e-49	ERF family protein

Publications ? help Back to Top
Zhang H,Hong Y,Huang L,Li D,Song F Arabidopsis AtERF014 acts as a dual regulator that differentially modulates immunity against Pseudomonas syringae pv. tomato and Botrytis cinerea. Sci Rep, 2016. 6: p. 30251 [PMID:27445230]