 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010543827.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 275aa MW: 31752.2 Da PI: 5.0623 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010543827.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.7 | 1.1e-19 | 73 | 126 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq+++Le+ F+ ++++ e++++LA++lgL rqV++WFqNrRa++k
XP_010543827.1 73 KKRRLTAEQVKALENNFAVENKLEPERKARLAEELGLHPRQVSIWFQNRRARWK 126
56689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 126.7 | 1e-40 | 72 | 164 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrl++eqvk+LE++F e+kLeperK++la+eLgl+prqv +WFqnrRAR+ktkqlEkdy +Lk+ ydalk + ++L++e ++L+++l+e
XP_010543827.1 72 EKKRRLTAEQVKALENNFAVENKLEPERKARLAEELGLHPRQVSIWFQNRRARWKTKQLEKDYGVLKADYDALKLDYSNLQQERQALTSKLEE 164
69**************************************************************************************99986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MKQFGSSDSL HPLFSISQPQ ESSVSHKHKY TVAEHMSSTD LRGYSEEFQT MLDDLVEEDA 60
LLEETLKNTA SEKKRRLTAE QVKALENNFA VENKLEPERK ARLAEELGLH PRQVSIWFQN 120
RRARWKTKQL EKDYGVLKAD YDALKLDYSN LQQERQALTS KLEELRAKFR EETKEEENKS 180
PTGQNREHRE EEDKLQIPII SPSSSSSLAY LNGSYSTSSS RSTAENFLLI GNYSTTMELQ 240
RVKLEEQCSI FSAEEPCNFF SVDHAPTLQW YIDGQ
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 97 | 103 | ERKARLA |
| 2 | 120 | 128 | RRARWKTKQ |
