PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010542118.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family SAP
Protein Properties Length: 452aa    MW: 49910 Da    PI: 7.1727
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010542118.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP711.77.8e-21714524455
             SAP   4 ssssssseseegseggeggdassgesegpsssrqr.aanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrlt 97 
                     sssssss+++ g+++  +   +sg +egps sr r  +n+vwpePfleala+qvaidas s+Grlaaa+alanvf+vcstw+avsrsdllwqrlt
  XP_010542118.1   1 SSSSSSSDDGGGQRRRVA---ASGPFEGPSPSRLRrGVNDVWPEPFLEALAAQVAIDASLSIGRLAAAPALANVFRVCSTWQAVSRSDLLWQRLT 92 
                     456666666666655554...5578999999996659********************************************************** PP

             SAP  98 rriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrd 192
                     r++W rt+l rdtW++e+iyrhrtarnfrtr ys++tl+fdp+dvde   +d l+Crcl+lsd ylaaGfadG+vrlf l+ r+hv+t++p  rd
  XP_010542118.1  93 RHVWGRTRLTRDTWNDEFIYRHRTARNFRTRSYSHFTLHFDPSDVDE---PDGLTCRCLTLSDVYLAAGFADGTVRLFLLNDRIHVRTLRPPPRD 184
                     *******************************************9998...689****************************************** PP

             SAP 193 rlGrfsravsGivisds....rlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvG 283
                     r+GrfsravsG v+sd+    rl+fat+dGdihva ++g+   + r+a++Gd+vndGalvdfaG+grWwvGl+aGvpGrafhiWd ete ++fvG
  XP_010542118.1 185 RFGRFSRAVSGTVLSDAdqspRLTFATMDGDIHVAGLEGPD-QQVRTAHVGDIVNDGALVDFAGCGRWWVGLFAGVPGRAFHIWDRETETTTFVG 278
                     **************98755558*****************65.89*************************************************** PP

             SAP 284 GsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer..rGlivssldasneayvvvdsrGvatvrrvenlee 376
                     GsltdPeavmGWh+ltelt+l+Gr+r++++etava t++r++v+dlrnqgv+l+++e     Gliv+s+da+ eayv vdsrG ++vrrv +l +
  XP_010542118.1 279 GSLTDPEAVMGWHTLTELTTLLGRIRISGEETAVASTRWRIMVIDLRNQGVILGDVEADhrGGLIVTSFDANREAYVSVDSRGRGNVRRVRTLGD 373
                     ******************************************************998765589******************************** PP

             SAP 377 vcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455
                     +c frv+g ++++v+gC+n   al+++ggv+rvWeie+ e ylys+rervgev+ +vaddrhva++++ +tihl+dfgaq
  XP_010542118.1 374 ICAFRVSGaSRGRVVGCMNALNALMWTGGVVRVWEIEHGE-YLYSFRERVGEVDVMVADDRHVAAATAGNTIHLWDFGAQ 452
                     ********88889*************************77.*************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.501.0E-665132No hitNo description
SuperFamilySSF813833.49E-666117IPR001810F-box domain
SuperFamilySSF509781.65E-11141243IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.108.7E-10144360IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509781.65E-11289449IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.108.7E-10402449IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
SSSSSSSDDG GGQRRRVAAS GPFEGPSPSR LRRGVNDVWP EPFLEALAAQ VAIDASLSIG  60
RLAAAPALAN VFRVCSTWQA VSRSDLLWQR LTRHVWGRTR LTRDTWNDEF IYRHRTARNF  120
RTRSYSHFTL HFDPSDVDEP DGLTCRCLTL SDVYLAAGFA DGTVRLFLLN DRIHVRTLRP  180
PPRDRFGRFS RAVSGTVLSD ADQSPRLTFA TMDGDIHVAG LEGPDQQVRT AHVGDIVNDG  240
ALVDFAGCGR WWVGLFAGVP GRAFHIWDRE TETTTFVGGS LTDPEAVMGW HTLTELTTLL  300
GRIRISGEET AVASTRWRIM VIDLRNQGVI LGDVEADHRG GLIVTSFDAN REAYVSVDSR  360
GRGNVRRVRT LGDICAFRVS GASRGRVVGC MNALNALMWT GGVVRVWEIE HGEYLYSFRE  420
RVGEVDVMVA DDRHVAAATA GNTIHLWDFG AQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010542118.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010542118.10.0PREDICTED: transcriptional regulator STERILE APETALA, partial
SwissprotQ9FKH10.0SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A1I9XFY40.0A0A1I9XFY4_9BRAS; Uncharacterized protein
TrEMBLD7MHW00.0D7MHW0_ARALL; Predicted protein
STRINGXP_010542118.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.10.0SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]