PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010541529.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 280aa    MW: 30977.9 Da    PI: 4.8018
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010541529.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_154.52.5e-17129187361
                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                     ++kr rr+ +NRe+ArrsR+RK+++++ Le  v++L ++N+ L k+l   +++ ++ ++
  XP_010541529.1 129 DIKRLRRMFSNRESARRSRRRKQEYLQDLESHVENLRGQNSNLYKQLIGATQQFQNADT 187
                     68******************************************999888888776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.3E-13127191IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.955129175IPR004827Basic-leucine zipper domain
PfamPF001705.7E-14130180IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.98E-12131180No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-12131175No hitNo description
PROSITE patternPS000360134149IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MDDKAGMKRS ASELAFEEYL MKAISSSPES TIDTIPSDPS SFDSKNRDYT CGLEESLFWI  60
EGITPLATID AHSSICENLS ADSPSSTNKP EARGEARRAG SGSSNDHSDE EEDAETEAGQ  120
SEQTDAPNDI KRLRRMFSNR ESARRSRRRK QEYLQDLESH VENLRGQNSN LYKQLIGATQ  180
QFQNADTSNR VLKSDVETLR VKVKLAEDLV ARGSLTSSLN QLLQTHLTPS PPQPINTLRF  240
AAGRNPSTTA ITVHDEQSSI TRQNSSLGLC CNIPSDDIWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143150RRSRRRKQ
2145150SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010541529.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010541529.10.0PREDICTED: basic leucine zipper 9-like
SwissprotQ9FUD31e-108BZIP9_ARATH; Basic leucine zipper 9
TrEMBLA0A1J3FKF51e-111A0A1J3FKF5_NOCCA; Basic leucine zipper 9
STRINGXP_010541529.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM63702641
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.19e-88basic leucine zipper 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ortiz-Espín A, et al.
    Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions.
    J. Exp. Bot., 2017. 68(5): p. 1025-1038
    [PMID:28184497]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]