![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_010539957.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
Family |
WRKY |
Protein Properties |
Length: 493aa MW: 53378.6 Da PI: 6.5151 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010539957.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Tha&pid=XP_010539957.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.9 | 5.8e-30 | 184 | 243 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+ ed +++++tYeg+Hnh+
XP_010539957.1 184 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCPEDMSILVTTYEGTHNHT 243
58***************************99****************************7 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 493 aa
Download sequence Send
to blast |
MDEAKEENRR LKLSLSKIMR DYENLQTEYN QMVQQQSKKS QEGHAEEGDG DDGGGGEFNK 60 ESEEFVSLSL GRRKSPTSSG SMRKDGKKKG LVMAEKNAEE HDGEGLSIAL MDYQAMNPYG 120 KEEKEETLEI NYNNNDDNQN QNQNLESSYG LKNYGDDHDE ELLQQNIVKK PRVSVRARCD 180 APTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK QVQRCPEDMS ILVTTYEGTH 240 NHTLSISATP MASATSAAAS ILLSGSSSSS SSSATTATAN LHGLNFYISG NSSRPKSSSY 300 LSPSNSLSSL GHPTITLDLT MSNSSLSSSS SSSLPSSQPF ISLLKNFSSS SPSGIPNSFA 360 QRSYPYTNLS FSTNNVNSPV TSTNTLYWAG HGGGVRTTYG NTVLGSTHQV PYHLIQNNRT 420 ESGPSDPFGR SYSQPIQSNV TKNMNQASLP AETIAAIATD PNFQSALANV LSSIIVSGDG 480 NVDLIKGQGE KNP
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |