 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010537223.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
| Family |
NAC |
| Protein Properties |
Length: 362aa MW: 41179.2 Da PI: 6.5062 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010537223.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 165 | 2.6e-51 | 28 | 160 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeelv++yL+ kv + l +++evd++++ePw+Lp+++k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkdke+
XP_010537223.1 28 LPPGFRFHPTDEELVSFYLASKVFNGGLFG-FHFPEVDLNRCEPWELPEMAKMGEKEWYFFSLRDRKYPTGLRTNRATAAGYWKATGKDKEISGG 121
79************************9766.459**************988999**************************************998 PP
NAM 96 .....kgelvglkktLvfykgrapkgektdWvmheyrle 129
+el+g+kktLvfykgrap+g kt+Wvmheyrle
XP_010537223.1 122 ggapaATELMGMKKTLVFYKGRAPRGIKTKWVMHEYRLE 160
666655666****************************85 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010014 | Biological Process | meristem initiation |
| GO:0010199 | Biological Process | organ boundary specification between lateral organs and the meristem |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MEIMMTMMLG VEDVMSELAG EEGRERGLPP GFRFHPTDEE LVSFYLASKV FNGGLFGFHF 60
PEVDLNRCEP WELPEMAKMG EKEWYFFSLR DRKYPTGLRT NRATAAGYWK ATGKDKEISG 120
GGGAPAATEL MGMKKTLVFY KGRAPRGIKT KWVMHEYRLE SHHISLRHSC KEEWVICRVF 180
NKSGDRKHVG FQPQLNQIHD PQQRSSSASS SSPSSSHHHH HRHHHHHHHH TLTLPPLLET 240
TPQTLTQLPS LPDHHVQSLH ENDISSNTNE LKTLINPIVT QLNSIIFSSE QDNNSSAMKP 300
EPSTLDNCSN HQNLDFCEDY YFQDTLFQEA DLSLLGLSSL SAPGDFHVMY DSPPAESWPL 360
DL
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator. Involved in molecular mechanisms regulating shoot apical meristem (SAM) formation during embryogenesis and organ separation. Required for axillary meristem initiation and separation of the meristem from the main stem. May act as an inhibitor of cell division. {ECO:0000269|PubMed:12837947, ECO:0000269|PubMed:17122068}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By BRM, at the chromatin level, and conferring a very specific spatial expression pattern. {ECO:0000269|PubMed:16854978}. |
| Publications
? help Back to Top |
- Chen C, et al.
Transcriptome profiling reveals roles of meristem regulators and polarity genes during fruit trichome development in cucumber (Cucumis sativus L.).
J. Exp. Bot., 2014. 65(17): p. 4943-58
[PMID:24962999] - Gonçalves B, et al.
A conserved role for CUP-SHAPED COTYLEDON genes during ovule development.
Plant J., 2015. 83(4): p. 732-42
[PMID:26119568] - Balkunde R,Kitagawa M,Xu XM,Wang J,Jackson D
SHOOT MERISTEMLESS trafficking controls axillary meristem formation, meristem size and organ boundaries in Arabidopsis.
Plant J., 2017. 90(3): p. 435-446
[PMID:28161901] - Espinosa-Ruiz A, et al.
TOPLESS mediates brassinosteroid control of shoot boundaries and root meristem development in Arabidopsis thaliana.
Development, 2017. 144(9): p. 1619-1628
[PMID:28320734] - Koyama T,Sato F,Ohme-Takagi M
Roles of miR319 and TCP Transcription Factors in Leaf Development.
Plant Physiol., 2017. 175(2): p. 874-885
[PMID:28842549]
|
