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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010533896.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
NAC |
Protein Properties |
Length: 286aa MW: 32886.1 Da PI: 10.0517 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010533896.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 172.5 | 1.3e-53 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeelvv+yLkkkv++ +l++ ++i+evd+yk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++
XP_010533896.1 15 LPPGFRFHPTDEELVVHYLKKKVASIPLPV-SIIAEVDLYKFDPWELPCKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTS 108
79****************************.89***************8888899*************************************998 PP
NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
++++vg+kk Lvfy g+ pkg kt+W+mheyrl
XP_010533896.1 109 nSHHKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142
66778***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MESANSCTKS SHPSLPPGFR FHPTDEELVV HYLKKKVASI PLPVSIIAEV DLYKFDPWEL 60 PCKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSNS HHKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLIDGDVPNS KPDLSSSKKS SLRLDDWVLC RIYKKNTSHR 180 PMDQRAGEDL MDGMIATVQN LHHQNQKSSA NSSSSVLDNN EEQHFFMDCS TMVVSSSSNG 240 SDHLPLIKQV SWRSQQWRRQ QQQQHRRRRQ RQQQQQQQQL FCVSTS
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 6e-76 | 14 | 178 | 19 | 171 | NAC domain-containing protein 19 |
3swm_B | 6e-76 | 14 | 178 | 19 | 171 | NAC domain-containing protein 19 |
3swm_C | 6e-76 | 14 | 178 | 19 | 171 | NAC domain-containing protein 19 |
3swm_D | 6e-76 | 14 | 178 | 19 | 171 | NAC domain-containing protein 19 |
3swp_A | 6e-76 | 14 | 178 | 19 | 171 | NAC domain-containing protein 19 |
3swp_B | 6e-76 | 14 | 178 | 19 | 171 | NAC domain-containing protein 19 |
3swp_C | 6e-76 | 14 | 178 | 19 | 171 | NAC domain-containing protein 19 |
3swp_D | 6e-76 | 14 | 178 | 19 | 171 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |