PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010532217.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 343aa    MW: 37547.7 Da    PI: 4.6562
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010532217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.77.9e-15120161247
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaai 47 
                     +  GVr++k +g+W+AeIr+p     + +r +lg+f t eeAaka+ 
  XP_010532217.1 120 KPVGVRQRK-WGKWAAEIRHPI----TkARTWLGTFATLEEAAKAYA 161
                     678*****9.**********72....36*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.2E-9120160IPR001471AP2/ERF domain
SMARTSM003801.5E-14120174IPR001471AP2/ERF domain
PROSITE profilePS5103216.766120177IPR001471AP2/ERF domain
PRINTSPR003679.9E-7121132IPR001471AP2/ERF domain
SuperFamilySSF541713.92E-14122167IPR016177DNA-binding domain
CDDcd000182.91E-19122160No hitNo description
Gene3DG3DSA:3.30.730.107.3E-19123164IPR001471AP2/ERF domain
PRINTSPR003679.9E-7143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MAERRKQPSG QTDMKPSKKP KSNNSLPESQ ISSQESETVR KIRIFVSDPY ATDDSSSDEE  60
SDCRKPSKTK RIVREINLLP LQSSLAPLLE VSETSSQNSN GVKTPAIRKR SKKVHRLTNK  120
PVGVRQRKWG KWAAEIRHPI TKARTWLGTF ATLEEAAKAY ADKKVEFDTL VSSSSASHSE  180
IHSRAVKPAV SLSEGSENSL RSRSSPSALD LDSSASASVP ADGDLLKDGT FSNTDIASGG  240
SGKDPLFDFN FADLQIPDLG FFMEEPLISG TNGQELDFDD FLMDDSEQLP DDFCLLDDVN  300
IHGFEGGGPT ELPEFDFADI DFELGDSKFA FPDQLAPLNV ACP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010532217.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010532217.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLV4KM741e-87V4KM74_EUTSA; Uncharacterized protein
STRINGXP_010532217.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM25372671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-64ERF family protein