PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010531490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 567aa MW: 61520.1 Da PI: 6.4429 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.2 | 2.1e-09 | 426 | 482 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 kr +r NR +A rs +RK +i+eLe kv++L++e ++L +l l+ + l++ XP_010531490.1 426 KRVKRILANRQSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTLLQRDSIGLTN 482 8999****************************************9999877665555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.0E-18 | 422 | 486 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.576 | 424 | 487 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.38E-11 | 426 | 477 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.3E-10 | 426 | 481 | No hit | No description |
Pfam | PF00170 | 2.4E-8 | 426 | 477 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.24E-24 | 427 | 476 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 567 aa Download sequence Send to blast |
MGDTEKGNTD MLQRIHSSLG TSSSSIPKQP LSMNQQLDIP HLNPNLIRSP QFPQFPQPFN 60 SSCSGAGDSG RRLGIPPSPP NPIPPISPYS QIPATRQPAS QNFNPGPTHS RSLSQPSSFF 120 SFDSLPPLSP SPFRDSPSAS DHDVPMEDRD SCGLNPSLPP SPFTRCNSSS SSSRVGDSLP 180 PRKAHRRSNS DIPFGFNSMM VSNSAPLIPP RPVERSVSGG EGTDWSKTAH LVKRESSCER 240 EGAGERKLEG DVVDDLFSAY MNLENIDVLN SSGAEDSKNG NENREDMESS RASGTKTNGG 300 NSSDTEGESS VDETGSSFQK IGTGSMGEKT EGVKRSAGRD IAPTSRHYRS VSMDSCFMGK 360 LNFGDESPKL PPSPGNLTGK VSPTNSFDGN SSNFSLELGN GEFTAAEMKK IMANEKLVEI 420 AVIDPKRVKR ILANRQSAAR SKERKMRYIA ELEHKVQTLQ TEATTLSAQL TLLQRDSIGL 480 TNQNNELKFR LQAMEQQAQL RDALNEALMG EVQRLKVVTG ELSHSGGRES ERSKLQALNP 540 EMFQQLNISQ PPSNQNGTIT TKPESNE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010531490.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010531490.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_010531491.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
TrEMBL | A0A178UWI2 | 0.0 | A0A178UWI2_ARATH; Uncharacterized protein | ||||
TrEMBL | Q8H1F0 | 0.0 | Q8H1F0_ARATH; Basic-leucine zipper (BZIP) transcription factor family protein | ||||
STRING | XP_010531490.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4224 | 27 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 0.0 | bZIP family protein |