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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010531114.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 266aa MW: 29256.2 Da PI: 10.0742 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.5 | 1.7e-14 | 196 | 243 | 4 | 51 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 + r +r++kNRe+A rsR+RK+a++ eLe +++ L+aeN +Lk e + XP_010531114.1 196 DIRHKRMIKNRESAARSRARKQAYTNELELEIAHLQAENARLKREQYQ 243 5689**************************************987655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.8E-10 | 193 | 255 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.392 | 195 | 240 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.06E-10 | 198 | 242 | No hit | No description |
Pfam | PF00170 | 2.2E-11 | 198 | 241 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.45E-24 | 198 | 251 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.7E-13 | 198 | 243 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 200 | 215 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence Send to blast |
MLPSAEQQGS HRVSDRNKNK NLNRVSSSTS SPSSSTSSSS LPTNSQTQNK HPTTMEEVWK 60 DITLSSLHHH QNPHDPRLGS HQAHDPNSIF QDFLNRPLNQ EPPASLSMGS SSNGDTSTAI 120 ALYGSPLPAP ATVLSLNSSA AFELLDNSDS HLLQNHPQLS SNVSSFTTPF EALASAGRFG 180 CYEKKRGQDS DGSSSDIRHK RMIKNRESAA RSRARKQAYT NELELEIAHL QAENARLKRE 240 QYQQRMAAAS QLPKKNKLQR SSTAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010531114.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010531114.1 | 0.0 | PREDICTED: protein FD-like isoform X3 | ||||
Swissprot | Q84JK2 | 6e-89 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A1J3C804 | 1e-97 | A0A1J3C804_NOCCA; Protein FD (Fragment) | ||||
TrEMBL | A0A1J3HBH2 | 5e-98 | A0A1J3HBH2_NOCCA; Protein FD (Fragment) | ||||
TrEMBL | A0A1J3J4V9 | 1e-97 | A0A1J3J4V9_NOCCA; Protein FD (Fragment) | ||||
STRING | XP_010531110.1 | 1e-144 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-87 | bZIP family protein |