PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010530318.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 505aa    MW: 55059.9 Da    PI: 6.2146
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010530318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.93.4e-11352410563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK+ +i eLe kv++L++e ++L  +l  l+  +a l++++
  XP_010530318.1 352 KRAKRILANRQSAARSKERKLRYIVELEHKVQTLQTEATTLSAQLTILQRDSAGLTNQN 410
                     9********************************************99999999998877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-18348412IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.576350413IPR004827Basic-leucine zipper domain
PfamPF001701.4E-9352410IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.23E-11352408No hitNo description
Gene3DG3DSA:1.20.5.1705.7E-9352409No hitNo description
CDDcd147032.44E-23353404No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MENFNSESNK RPGIPPSHPN NPATFAYPHQ AIGSRLGYQQ LGSRNPNPGP SHSRSLSQPS  60
FFSLDSLPPF SPTPFKEPSI SPTTGEIGSK DVSMDDKSGP TSRSNETAAI TDKLPPREGH  120
RRSNSDIPLG YSGMIHSSMQ SVHLGNMGIL DGIVPGSSTE EKPIQLVKRE SEWSGDGKSV  180
AEGTGERKLE GELADDLVSA YMNLDIIAPL SSGATEEKDL GSRASGSKTN GGDGSDNEVE  240
SCVNGNAFGP SSSSAASQRR EGIKRTASGD IVPSGRHQRS VSMDSYMGGF IFDEETLKAS  300
PQLGNQQLPS ESGDWRLKNL NFEFPRGEFS EAELKRIMDD EKLTEIASSD PKRAKRILAN  360
RQSAARSKER KLRYIVELEH KVQTLQTEAT TLSAQLTILQ RDSAGLTNQN NELKFRLQAM  420
EQKAQLKDAL NEALAAEIHR LKIATAEISG ENHLSNRMAQ QLSINSGIFP TQARNNIYDQ  480
LQQQNLQIER GNADSAMSDQ RSNRP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010530318.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010530317.10.0PREDICTED: probable transcription factor PosF21 isoform X1
RefseqXP_010530318.10.0PREDICTED: probable transcription factor PosF21 isoform X2
TrEMBLA0A061FDF40.0A0A061FDF4_THECC; Basic-leucine zipper transcription factor family protein, putative isoform 1
STRINGXP_010530318.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-101bZIP family protein