PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010530317.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 505aa MW: 55059.9 Da PI: 6.2146 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.9 | 3.4e-11 | 352 | 410 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L +l l+ +a l++++ XP_010530317.1 352 KRAKRILANRQSAARSKERKLRYIVELEHKVQTLQTEATTLSAQLTILQRDSAGLTNQN 410 9********************************************99999999998877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.4E-18 | 348 | 412 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.576 | 350 | 413 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-9 | 352 | 410 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.23E-11 | 352 | 408 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.7E-9 | 352 | 409 | No hit | No description |
CDD | cd14703 | 2.44E-23 | 353 | 404 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence Send to blast |
MENFNSESNK RPGIPPSHPN NPATFAYPHQ AIGSRLGYQQ LGSRNPNPGP SHSRSLSQPS 60 FFSLDSLPPF SPTPFKEPSI SPTTGEIGSK DVSMDDKSGP TSRSNETAAI TDKLPPREGH 120 RRSNSDIPLG YSGMIHSSMQ SVHLGNMGIL DGIVPGSSTE EKPIQLVKRE SEWSGDGKSV 180 AEGTGERKLE GELADDLVSA YMNLDIIAPL SSGATEEKDL GSRASGSKTN GGDGSDNEVE 240 SCVNGNAFGP SSSSAASQRR EGIKRTASGD IVPSGRHQRS VSMDSYMGGF IFDEETLKAS 300 PQLGNQQLPS ESGDWRLKNL NFEFPRGEFS EAELKRIMDD EKLTEIASSD PKRAKRILAN 360 RQSAARSKER KLRYIVELEH KVQTLQTEAT TLSAQLTILQ RDSAGLTNQN NELKFRLQAM 420 EQKAQLKDAL NEALAAEIHR LKIATAEISG ENHLSNRMAQ QLSINSGIFP TQARNNIYDQ 480 LQQQNLQIER GNADSAMSDQ RSNRP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010530317.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010530317.1 | 0.0 | PREDICTED: probable transcription factor PosF21 isoform X1 | ||||
Refseq | XP_010530318.1 | 0.0 | PREDICTED: probable transcription factor PosF21 isoform X2 | ||||
TrEMBL | A0A061FDF4 | 0.0 | A0A061FDF4_THECC; Basic-leucine zipper transcription factor family protein, putative isoform 1 | ||||
STRING | XP_010530318.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4224 | 27 | 57 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-101 | bZIP family protein |