PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010529453.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family WRKY
Protein Properties Length: 599aa    MW: 64399.3 Da    PI: 6.7043
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010529453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.58.6e-31347405259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
  XP_010529453.1 347 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 405
                     7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-33331407IPR003657WRKY domain
SuperFamilySSF1182905.62E-28339407IPR003657WRKY domain
PROSITE profilePS5081129.895341407IPR003657WRKY domain
SMARTSM007743.7E-37346406IPR003657WRKY domain
PfamPF031069.8E-27348405IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 599 aa     Download sequence    Send to blast
MEKGYNKGYG TITLDSSDCT FLPGKSPPFP RVSDSSLLLH SSHHHDLSGN SNADNRDMFR  60
FPMSLGGPRG GGDLRQGQPP PADEHRVAVD EVDFFSEKRD RVSRDNTADE TNRVHVKMEI  120
SRVEDDDRSR DVNIGLNLLT ANAGSDESTV DDGLSMDMEE KRAKSEMVQL QGELQKMKEE  180
NQRLREMLNQ ASSNYSSLQM QLVAVMRQQE HRNSSQDHLL GAEGKSDGRT RQEQPAMVPR  240
QFIDLGPLSS AAEHDTEVSS EERTTVRSGS PPPILENSNQ RDDGKRLLGR EASPETESNG  300
WGNPKKVPKH NPSGNGNGNV IDQSAAEATM RKARVSVRAR SEVPMISDGC QWRKYGQKMA  360
KGNPCPRAYY RCTMAVGCPV RKQVQRCAED RSILITTYEG NHNHPLPPAA MAMASTTTAA  420
ASMLLSGSMA SQEGLMNPTN LLARAIFPCS SSMATISASA PFPTITLDLT TNSANAGNNP  480
NPNATATATA NNPLLQFAQR PGFAASALNP SVLPQVVSQA LYYNNNQQSK FSGLQLPAQP  540
LPTAAATAAI AADPNFAAAL AAAITSIING SGHQPNSGGG NSNNNNSNNV ATTSNGDTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-22333409176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00447DAPTransfer from AT4G22070Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010529453.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019057239.10.0PREDICTED: probable WRKY transcription factor 31 isoform X2
SwissprotQ93WT00.0WRK31_ARATH; Probable WRKY transcription factor 31
TrEMBLA0A1J3ETF80.0A0A1J3ETF8_NOCCA; Putative WRKY transcription factor 31
STRINGXP_010529450.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22070.10.0WRKY DNA-binding protein 31