PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010529452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | WRKY | ||||||||
Protein Properties | Length: 600aa MW: 64527.4 Da PI: 6.7043 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.5 | 8.6e-31 | 348 | 406 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_010529452.1 348 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 406 7*********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.4E-33 | 332 | 408 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.62E-28 | 340 | 408 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.895 | 342 | 408 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.7E-37 | 347 | 407 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.8E-27 | 349 | 406 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 600 aa Download sequence Send to blast |
MEKGYNKGYG TITLDSSDCT FLPGKSPPFP RVSDSSLLLH SSHHHDLSGN SNADNRDMFR 60 FPMSLGGPRG GGDLRQGQPP PADEHRVAVD EVDFFSEKRD RVSRDNTADE TNRVHVKMEI 120 SRVEDDDRSR DVNIGLNLLT ANAGSDESTV DDGLSMDMEE KRAKSEQMVQ LQGELQKMKE 180 ENQRLREMLN QASSNYSSLQ MQLVAVMRQQ EHRNSSQDHL LGAEGKSDGR TRQEQPAMVP 240 RQFIDLGPLS SAAEHDTEVS SEERTTVRSG SPPPILENSN QRDDGKRLLG REASPETESN 300 GWGNPKKVPK HNPSGNGNGN VIDQSAAEAT MRKARVSVRA RSEVPMISDG CQWRKYGQKM 360 AKGNPCPRAY YRCTMAVGCP VRKQVQRCAE DRSILITTYE GNHNHPLPPA AMAMASTTTA 420 AASMLLSGSM ASQEGLMNPT NLLARAIFPC SSSMATISAS APFPTITLDL TTNSANAGNN 480 PNPNATATAT ANNPLLQFAQ RPGFAASALN PSVLPQVVSQ ALYYNNNQQS KFSGLQLPAQ 540 PLPTAAATAA IAADPNFAAA LAAAITSIIN GSGHQPNSGG GNSNNNNSNN VATTSNGDTR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-22 | 334 | 410 | 1 | 76 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00447 | DAP | Transfer from AT4G22070 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010529452.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010529450.1 | 0.0 | PREDICTED: probable WRKY transcription factor 31 isoform X1 | ||||
Swissprot | Q93WT0 | 0.0 | WRK31_ARATH; Probable WRKY transcription factor 31 | ||||
TrEMBL | A0A1J3ETF8 | 0.0 | A0A1J3ETF8_NOCCA; Putative WRKY transcription factor 31 | ||||
STRING | XP_010529450.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22070.1 | 0.0 | WRKY DNA-binding protein 31 |