![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010529147.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
WRKY |
Protein Properties |
Length: 348aa MW: 38219.5 Da PI: 7.7551 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010529147.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Tha&pid=XP_010529147.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.3 | 1.5e-33 | 187 | 244 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp+vv++tYeg+Hnh+
XP_010529147.1 187 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQRCNVKKRVERSYQDPTVVITTYEGQHNHP 244
8********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 348 aa
Download sequence Send
to blast |
MSNETKDLYS YPYASSYLFE DDHSYNHKII NPLDHHLVSG PSAFGNNISQ GFDPSSYTTL 60 SFTDCLRSSP TAYESLEKAF GLSPSSSEVF SSIDQGNVSH QKGSNIGATT ESTTRVSVSS 120 NSSSEADRPD EDSGRSRRKR EAVTGGGEED HGGENSKKIG KAKKNEEKKQ KEPRVAFMTK 180 SEVDHLEDGY RWRKYGQKAV KNSPYPRSYY RCTTQRCNVK KRVERSYQDP TVVITTYEGQ 240 HNHPIPSNLR GSSAAAMFST ASYYSSADPR TLAHDFLRTS SANYSGGNLG GGGAAVLMHG 300 YGQSQSQSGG GNNSVNVNPS SQQHAGYLQG SDYELLKEIF PSFFKHEP
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |