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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_010528984.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
M-type_MADS |
Protein Properties |
Length: 329aa MW: 37010.6 Da PI: 8.5754 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010528984.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 59.9 | 3.2e-19 | 13 | 61 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++ + +r++ f +R+ +++KKA+EL +LCd+evavi ++++g++++++
XP_010528984.1 13 SSKAQAKRKTGFERRQLTVMKKAQELATLCDVEVAVICYGPDGEIQTWP 61
678899******************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MSSSCSSISS SSSSKAQAKR KTGFERRQLT VMKKAQELAT LCDVEVAVIC YGPDGEIQTW 60 PREMSKVKEV AEKYKKLSSA DKGKKNLTLH QFLGKIKKEE DDKKKKMKTG HDLDRYTAEE 120 LAVLFDSLDH KSQNLQERRQ FLHSQKRMTA DLSETKNDQF SVNQETKKPE SDLSLVPFEQ 180 QAAESVHLQE TLTYGSFNSV GHGSGPPHYG NFGPAINQAP TPLACYPNFA TNGEWAYNFD 240 FPGTQMGNQM SRNDSMMNMM NIGDYSRFLA PQAYQNHAFQ HPSGFIPNNI GFQTPLPQIQ 300 TPTPTLQQFD PLSAWNPTPS AVSRMFSRF
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