PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010527689.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 486aa    MW: 53668.4 Da    PI: 7.0327
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010527689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.33.2e-08181243163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     eke +r rr   NRe+Ar   +R++a +eeL +k+  L+ eN +Lk e +   ke ++l++ +
  XP_010527689.1 181 EKEERRIRRILANRESARQTIRRRQALCEELNRKASDLSYENAQLKREKDWALKEFQSLEMIN 243
                     78999*******************************************999999999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-9181245IPR004827Basic-leucine zipper domain
PfamPF001704.8E-7181243IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703183246IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-6185240No hitNo description
Gene3DG3DSA:1.20.5.1702.1E-6185251No hitNo description
CDDcd147023.73E-13186237No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
MELEQVSSCC SSSSPSPSSS AASDSSPLGE GAADRTELEA AEALADLAQL ALVREKVVES  60
AAKWGRKGKR VRKRVKNESP PCNPVLKPAD SEPPASDPAE FAECIEPLVI SNALGNINEK  120
LGSLERAVKE EQEAQAIGRD LTIVPVKTEV DEETPKQLLA STLKCRSSGG GRWRQNLSEA  180
EKEERRIRRI LANRESARQT IRRRQALCEE LNRKASDLSY ENAQLKREKD WALKEFQSLE  240
MINKHLKEQL SRSIKPEAKE HDEAPKASQV ETAASAPFCC YNQHPFQLFC WSPVIQSSSS  300
AALPQNGLTV PSMISARAST KVEPSKEQEK PGNDDGMKPP FYIVPCPWFL PPPGQTNGVQ  360
TVVPYELENI QEGCSLRHVD NIQSLPSRLP SITKEGDSTR GFYDLNKSAP DIPAEGEPSF  420
FFKHEEASQP ANGPALISLP EESRGYVGYS SSKRLVDSVA AADARKRRKE LTRLKNLHSR  480
QCRMQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1464469RKRRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010527689.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010527689.10.0PREDICTED: uncharacterized protein LOC104804992 isoform X2
TrEMBLV4L5161e-130V4L516_EUTSA; Uncharacterized protein (Fragment)
STRINGXP_010527686.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.11e-113bZIP family protein