PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010527332.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 437aa    MW: 47072.8 Da    PI: 6.8105
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010527332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.75.8e-142422911059
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                     + +NRe+ArrsR+RK++++ eLe+ v +L +e ++L k+l+ +++++++ 
  XP_010527332.1 242 MLSNRESARRSRRRKQEQMNELETQVGQLRGEHSTLLKRLSDMNNKYDTA 291
                     689***********************************999999998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-13231297IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-9241287No hitNo description
PfamPF001702.5E-11242289IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-9242288No hitNo description
PROSITE profilePS502179.415245289IPR004827Basic-leucine zipper domain
PfamPF124984.6E-20304401IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MNSVFSIDDL TDSFWSAVSP AAAAAVMGEG MSRSQSEWAF QRLIEEMSVS AGSPISRSSS  60
ETGNVIGRSL PPVIQPEPSV ARPLGGGADA AGDVVEIQRP ENHSRRVEEQ GSRNHGSSST  120
IGVDPDHYHA ILKSKLDLAC AAVALRVAKV KPEDSSTSAT NQKEPPMVGS QAQGSAAMKM  180
SPGSSSINVA PSLGLPKKSE APIRQATSGS SPDDSDDDEF DGDMEMTGSI EPEAFKVKSL  240
VMLSNRESAR RSRRRKQEQM NELETQVGQL RGEHSTLLKR LSDMNNKYDT AAVDNRILKA  300
DIETLRTKVK MAEEMVKRVT GMNPLLLARS NTTNIGVPVD NTLMDSSRIS VMPMQPNSNH  360
IMKPAIGNIT GTTPNQRLEN NFGNNTLVHP NMNPVTVTGA EKVTKLPPSD QVSHFAPGPN  420
RYESLSHWNP AVAKNKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1249256RRSRRRKQ
2251256SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'-ACGT-3' box, especially present in G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010527332.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019056989.10.0PREDICTED: basic leucine zipper 25-like
SwissprotQ9M1G61e-103BZP25_ARATH; Basic leucine zipper 25
TrEMBLA0A1J3I3581e-116A0A1J3I358_NOCCA; Basic leucine zipper 25
STRINGXP_010527332.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58482645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.11e-103basic leucine zipper 25
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Jain P, et al.
    A-ZIP53, a dominant negative reveals the molecular mechanism of heterodimerization between bZIP53, bZIP10 and bZIP25 involved in Arabidopsis seed maturation.
    Sci Rep, 2017. 7(1): p. 14343
    [PMID:29084982]
  4. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]