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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_010527152.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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| Family |
SRS |
| Protein Properties |
Length: 190aa MW: 21794.3 Da PI: 9.7382 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010527152.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 115.7 | 6.5e-36 | 23 | 133 | 36 | 154 |
DUF702 36 athvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkeletsslPeevsseavfrcvrvs.svddgeee 129
+ h+kstWvpa++rr+r q ++++++ ++++++ +r+ +++ +++ ++l ++ ++ +++P+e++s+avfrcvrvs svddg+++
XP_010527152.1 23 SCHIKSTWVPAYRRRQRLQPQTQSQT---QTQTQQPLQRPV----HHHYSTNPKRLREGLGI--ITPTHFPAELNSTAVFRCVRVSsSVDDGKDQ 108
57**************9766555433...333344444444....45666666776666533..45566****************7369****** PP
DUF702 130 laYqtavsigGhvfkGiLydqGlee 154
+aYqt+vsigGhvfkGiLydqG+e+
XP_010527152.1 109 YAYQTTVSIGGHVFKGILYDQGPED 133
***********************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 190 aa
Download sequence Send
to blast |
MPFYDADTRQ VHHQWASFVA GASCHIKSTW VPAYRRRQRL QPQTQSQTQT QTQQPLQRPV 60
HHHYSTNPKR LREGLGIITP THFPAELNST AVFRCVRVSS SVDDGKDQYA YQTTVSIGGH 120
VFKGILYDQG PEDEQRIIST VHPRHHHHHH HHQRQEFLLP SSSSCPLMTT TSPFTAFMSG 180
TEFSPPRQKP
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). {ECO:0000269|PubMed:16740146}. |
